BLASTX nr result

ID: Coptis24_contig00037622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037622
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-li...    60   2e-07
ref|XP_003520199.1| PREDICTED: zinc finger protein NUTCRACKER-li...    56   4e-06

>ref|XP_002274683.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 456

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 58/163 (35%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
 Frame = +3

Query: 108 TEVSISSWDPLHN---HDPTSNPIKLEFHDFHQQQTSDPASNQIPNHQQVSNINSFFQEQ 278
           T +S++SWD   N   ++P  +P++++  + H  Q   P S Q            FFQEQ
Sbjct: 250 THISLTSWDSPQNPNPNNPNQSPLQIK-PEIHHLQIPSPISPQ------------FFQEQ 296

Query: 279 ------LQQKIFVTTPTFLQPHPYXXXXXXXXXXXNLSATALLQKAANVGVAPISSPTQA 440
                  QQK  +T+P F   H             +LSATALLQKAA VG     S T  
Sbjct: 297 PPPPPPTQQKNLMTSP-FQNFH-----VSTQPTSAHLSATALLQKAATVGATANISFT-- 348

Query: 441 QSVGHMTSFVSQFQMADSGSGNHMVGASISPGCLAPHSGHFAT 569
              G   S +S+  MA+ GS  H VGA ISP  L   SG+ +T
Sbjct: 349 ---GSSQSHMSRLHMAELGSFPH-VGAGISPEYLGFASGNLST 387


>ref|XP_003520199.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]
          Length = 458

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
 Frame = +3

Query: 120 ISSWDPLHNHDPTSNP---------IKLEFHDFHQQQTSDPASNQIPNHQQVSNINSFF- 269
           I+ WDP  N +P  NP         IK E H+FH   T+  ++         +NI+S F 
Sbjct: 237 INPWDPNPNPNPNPNPSNLTTLHNNIKPESHNFHIPNTTTTSTAN-------NNISSSFL 289

Query: 270 -QEQLQQKIFVTTPTFLQPHPYXXXXXXXXXXXNLSATALLQKAANVGVAPISSPTQAQS 446
              Q   K  +T+P F   H             +LSATALLQKAA VG A I+ PT    
Sbjct: 290 HHHQHPNKSMITSP-FRDLHERTQPPSNAATSAHLSATALLQKAATVGAAAITGPTH--- 345

Query: 447 VGHMTSFVSQFQMADSGS 500
                  V+Q  MA+ G+
Sbjct: 346 -------VTQLSMAELGT 356


Top