BLASTX nr result

ID: Coptis24_contig00037601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037601
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15323.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial...   117   1e-24
gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indi...   115   4e-24
ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-...   114   8e-24
ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>emb|CBI15323.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  117 bits (292), Expect = 1e-24
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
 Frame = -3

Query: 366 KGAVANAHLRNQSKKFI-DHVLFMRSQLQRRGY----QVHRYNTPRYNWRSSIPTADNVV 202
           K  +  A L+  SK      V F+R+Q  RR +        Y     +W S + T D VV
Sbjct: 108 KQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTND-VV 166

Query: 201 LGLISANVAVFMLWRYLDTSFMRKHFMISVENVRSGRVHTMITSAFSHIDVGHLLSNMIG 22
           LGLI ANVAVFMLWR  D  FM  +F IS++N +SGR+HT+ITSAFSHID+GHL+SNMIG
Sbjct: 167 LGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFSHIDIGHLISNMIG 226

Query: 21  LYFFG 7
           LYFFG
Sbjct: 227 LYFFG 231


>ref|XP_002265768.1| PREDICTED: rhomboid protein 1, mitochondrial [Vitis vinifera]
          Length = 333

 Score =  117 bits (292), Expect = 1e-24
 Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
 Frame = -3

Query: 366 KGAVANAHLRNQSKKFI-DHVLFMRSQLQRRGY----QVHRYNTPRYNWRSSIPTADNVV 202
           K  +  A L+  SK      V F+R+Q  RR +        Y     +W S + T D VV
Sbjct: 79  KQFLPTALLKGSSKTLAASRVGFLRAQFPRRSFGFSPSFDSYGRRWRSWLSGLSTND-VV 137

Query: 201 LGLISANVAVFMLWRYLDTSFMRKHFMISVENVRSGRVHTMITSAFSHIDVGHLLSNMIG 22
           LGLI ANVAVFMLWR  D  FM  +F IS++N +SGR+HT+ITSAFSHID+GHL+SNMIG
Sbjct: 138 LGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTLITSAFSHIDIGHLISNMIG 197

Query: 21  LYFFG 7
           LYFFG
Sbjct: 198 LYFFG 202


>gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indica Group]
          Length = 327

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = -3

Query: 240 NWRSSIPTADNVVLGLISANVAVFMLWRYLDTSFMRKHFMISVENVRSGRVHTMITSAFS 61
           +W   +P+AD  VL L+ ANV VFMLW   D SFMR+HFMIS++N +SGR+HT++T+AFS
Sbjct: 117 SWAKWLPSADGAVLMLVGANVGVFMLWHLADPSFMRRHFMISLDNFKSGRLHTLLTNAFS 176

Query: 60  HIDVGHLLSNMIGLYFFGSS 1
           H + GHL+SNMIGLYFFGSS
Sbjct: 177 HAESGHLISNMIGLYFFGSS 196


>ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-like [Cucumis sativus]
          Length = 336

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/109 (54%), Positives = 77/109 (70%)
 Frame = -3

Query: 333 QSKKFIDHVLFMRSQLQRRGYQVHRYNTPRYNWRSSIPTADNVVLGLISANVAVFMLWRY 154
           +S+       F + + Q +   VH++   R +W   + T + VVLGLI ANVAVF+LWR 
Sbjct: 98  ESRSLFTGTPFSKLKFQLKPGFVHQWGGRR-SWFQRL-TPNEVVLGLIIANVAVFLLWRI 155

Query: 153 LDTSFMRKHFMISVENVRSGRVHTMITSAFSHIDVGHLLSNMIGLYFFG 7
            D  FM K+F IS+ENVRSGR+HT+ITSAFSHID GH++SNM+GLYFFG
Sbjct: 156 ADPIFMSKNFTISLENVRSGRIHTLITSAFSHIDTGHIVSNMVGLYFFG 204


>ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|222855471|gb|EEE93018.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246 RYNWRSSIP--TADNVVLGLISANVAVFMLWRYLDTSFMRKHFMISVENVRSGRVHTMIT 73
           R  WRS     +ADNVVLGLI AN AVFMLWR  D  FM ++FMIS++N RSGR+HT++T
Sbjct: 29  RRGWRSWFNRLSADNVVLGLIIANAAVFMLWRIEDQKFMMENFMISLDNFRSGRIHTLVT 88

Query: 72  SAFSHIDVGHLLSNMIGLYFFGSS 1
           SAFSHID+GH+  NMIGLYFFG++
Sbjct: 89  SAFSHIDIGHIAFNMIGLYFFGTN 112


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