BLASTX nr result

ID: Coptis24_contig00037496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037496
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278086.1| PREDICTED: amino acid permease 2 [Vitis vini...   145   3e-33
ref|XP_002307053.1| amino acid permease [Populus trichocarpa] gi...   144   6e-33
ref|XP_002312967.1| amino acid permease [Populus trichocarpa] gi...   142   2e-32
emb|CBI21586.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002275881.1| PREDICTED: amino acid permease 2 isoform 1 [...   142   4e-32

>ref|XP_002278086.1| PREDICTED: amino acid permease 2 [Vitis vinifera]
           gi|297744622|emb|CBI37884.3| unnamed protein product
           [Vitis vinifera]
          Length = 512

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/90 (82%), Positives = 81/90 (90%), Gaps = 6/90 (6%)
 Frame = +2

Query: 2   FSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAENGSFKGTLTGISIGD------V 163
           FSQIPDFDQVWWLSIVAA+MSFTYS+VGL LGV KVAENGSFKG+LTGISIG       V
Sbjct: 206 FSQIPDFDQVWWLSIVAAIMSFTYSSVGLGLGVAKVAENGSFKGSLTGISIGTVTHAGVV 265

Query: 164 TATQKLWRSMQALGAIAFAYSYSVILIEIQ 253
           T+TQKLWRS+QALGAIAFAYS+S+ILIEIQ
Sbjct: 266 TSTQKLWRSLQALGAIAFAYSFSLILIEIQ 295


>ref|XP_002307053.1| amino acid permease [Populus trichocarpa]
           gi|222856502|gb|EEE94049.1| amino acid permease [Populus
           trichocarpa]
          Length = 463

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +2

Query: 5   SQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAENGSFKGTLTGISIGDVTATQKLW 184
           SQIPDFDQ+WWLSIVAAVMSFTYST+GL LG+ KVA NG+FKG+LTGISIG VT T+K+W
Sbjct: 164 SQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIGKVAANGTFKGSLTGISIGTVTETEKIW 223

Query: 185 RSMQALGAIAFAYSYSVILIEIQ 253
           RS QALGAIAFAYSYSVILIEIQ
Sbjct: 224 RSFQALGAIAFAYSYSVILIEIQ 246


>ref|XP_002312967.1| amino acid permease [Populus trichocarpa]
           gi|222849375|gb|EEE86922.1| amino acid permease [Populus
           trichocarpa]
          Length = 469

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/90 (80%), Positives = 80/90 (88%), Gaps = 6/90 (6%)
 Frame = +2

Query: 2   FSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAENGSFKGTLTGISI------GDV 163
           FSQIPDFDQVWWLSIVAA+MSFTYSTVGL LG+ KVA NG+FKG+LTGISI      G V
Sbjct: 163 FSQIPDFDQVWWLSIVAAIMSFTYSTVGLGLGIGKVAGNGTFKGSLTGISIGTETHAGPV 222

Query: 164 TATQKLWRSMQALGAIAFAYSYSVILIEIQ 253
           T+TQKLWRS+QALGAIAFAYS+S+ILIEIQ
Sbjct: 223 TSTQKLWRSLQALGAIAFAYSFSIILIEIQ 252


>emb|CBI21586.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  142 bits (357), Expect = 4e-32
 Identities = 70/89 (78%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   FSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAENGSFKGTLTGISIGDVTATQKL 181
           FSQIPDFDQ+WWLSIVAAVMSFTYS++GL+LGV KV   G FKG+LTGISIG VT TQK+
Sbjct: 187 FSQIPDFDQIWWLSIVAAVMSFTYSSIGLALGVAKVVAAGGFKGSLTGISIGTVTQTQKI 246

Query: 182 WRSMQALGAIAFAYSYSVILIEIQVLLYS 268
           WRS QALG IAFAYSYS+ILIEIQ  L S
Sbjct: 247 WRSFQALGDIAFAYSYSIILIEIQDTLKS 275


>ref|XP_002275881.1| PREDICTED: amino acid permease 2 isoform 1 [Vitis vinifera]
          Length = 487

 Score =  142 bits (357), Expect = 4e-32
 Identities = 70/89 (78%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   FSQIPDFDQVWWLSIVAAVMSFTYSTVGLSLGVTKVAENGSFKGTLTGISIGDVTATQKL 181
           FSQIPDFDQ+WWLSIVAAVMSFTYS++GL+LGV KV   G FKG+LTGISIG VT TQK+
Sbjct: 187 FSQIPDFDQIWWLSIVAAVMSFTYSSIGLALGVAKVVAAGGFKGSLTGISIGTVTQTQKI 246

Query: 182 WRSMQALGAIAFAYSYSVILIEIQVLLYS 268
           WRS QALG IAFAYSYS+ILIEIQ  L S
Sbjct: 247 WRSFQALGDIAFAYSYSIILIEIQDTLKS 275


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