BLASTX nr result

ID: Coptis24_contig00037493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037493
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16216.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002532810.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>emb|CBI16216.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/49 (65%), Positives = 37/49 (75%)
 Frame = +1

Query: 1   PRIRGRFARNDEVGESSQGQWNQLEREETEEDDDIWLNLFDAFSVNLIP 147
           PRIRGRFARN+E+ + SQ QW+ L  EE EEDDD W N  DAFS NL+P
Sbjct: 203 PRIRGRFARNEEIEKGSQSQWSNLGGEECEEDDDNWTNFLDAFSANLVP 251


>ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|222872731|gb|EEF09862.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 37/49 (75%)
 Frame = +1

Query: 1   PRIRGRFARNDEVGESSQGQWNQLEREETEEDDDIWLNLFDAFSVNLIP 147
           PRIRGRFARNDE+ ++ Q QW+ +  EE EEDDD W++  D+FS N +P
Sbjct: 179 PRIRGRFARNDEIEKNPQLQWSNVSGEEDEEDDDNWIDFLDSFSENSVP 227


>ref|XP_002532810.1| conserved hypothetical protein [Ricinus communis]
           gi|223527430|gb|EEF29567.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = +1

Query: 1   PRIRGRFARNDEVGESSQGQW-NQLEREETEEDDDIWLNLFDAFSVNLIP 147
           PRIRGRFARNDE+ +  Q QW N +  EE E+ DD W++  DAFS N IP
Sbjct: 91  PRIRGRFARNDEIEKIPQSQWCNNISGEEDEDYDDNWIDFLDAFSANSIP 140


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