BLASTX nr result

ID: Coptis24_contig00037480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037480
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16803.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002282325.1| PREDICTED: uncharacterized protein LOC100245...   110   2e-22
ref|XP_002314588.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|NP_189269.2| Melibiase family protein [Arabidopsis thaliana]...   105   5e-21
dbj|BAB02198.1| unnamed protein product [Arabidopsis thaliana]        105   5e-21

>emb|CBI16803.3| unnamed protein product [Vitis vinifera]
          Length = 1408

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = +1

Query: 16  IQGAAYNESGRLWTAKDIGLTDRKCAWMPQGFMSVNTKLGAGRAFLRSLHQQYAECGVDF 195
           I+G  Y E+GR WTAKDI LT+R CAWMP GFMSVNT LGAGRAFLRSL++QYAE GVDF
Sbjct: 158 IKGGVYEENGRQWTAKDIALTERACAWMPHGFMSVNTNLGAGRAFLRSLYKQYAEWGVDF 217

Query: 196 VKHD 207
           VKHD
Sbjct: 218 VKHD 221


>ref|XP_002282325.1| PREDICTED: uncharacterized protein LOC100245809 [Vitis vinifera]
          Length = 647

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = +1

Query: 16  IQGAAYNESGRLWTAKDIGLTDRKCAWMPQGFMSVNTKLGAGRAFLRSLHQQYAECGVDF 195
           I+G  Y E+GR WTAKDI LT+R CAWMP GFMSVNT LGAGRAFLRSL++QYAE GVDF
Sbjct: 158 IKGGVYEENGRQWTAKDIALTERACAWMPHGFMSVNTNLGAGRAFLRSLYKQYAEWGVDF 217

Query: 196 VKHD 207
           VKHD
Sbjct: 218 VKHD 221


>ref|XP_002314588.1| predicted protein [Populus trichocarpa] gi|222863628|gb|EEF00759.1|
           predicted protein [Populus trichocarpa]
          Length = 649

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = +1

Query: 22  GAAYNESGRLWTAKDIGLTDRKCAWMPQGFMSVNTKLGAGRAFLRSLHQQYAECGVDFVK 201
           G AY ESGR W AKDIG+ +R CAWM  GFMSVNTKLGAGRAFLRSL++QYAE GVDFVK
Sbjct: 154 GGAYEESGRQWRAKDIGIKERACAWMSHGFMSVNTKLGAGRAFLRSLYEQYAEWGVDFVK 213

Query: 202 HD 207
           HD
Sbjct: 214 HD 215


>ref|NP_189269.2| Melibiase family protein [Arabidopsis thaliana]
           gi|332643630|gb|AEE77151.1| Melibiase family protein
           [Arabidopsis thaliana]
          Length = 647

 Score =  105 bits (261), Expect = 5e-21
 Identities = 46/64 (71%), Positives = 54/64 (84%)
 Frame = +1

Query: 16  IQGAAYNESGRLWTAKDIGLTDRKCAWMPQGFMSVNTKLGAGRAFLRSLHQQYAECGVDF 195
           ++G AY ESGR W AKDIG+ +R C WM  GFMSVNTKLGAG+AFLRSL++QYAE GVDF
Sbjct: 163 VKGGAYEESGRQWRAKDIGIKERACVWMSHGFMSVNTKLGAGKAFLRSLYRQYAEWGVDF 222

Query: 196 VKHD 207
           +KHD
Sbjct: 223 IKHD 226


>dbj|BAB02198.1| unnamed protein product [Arabidopsis thaliana]
          Length = 676

 Score =  105 bits (261), Expect = 5e-21
 Identities = 46/64 (71%), Positives = 54/64 (84%)
 Frame = +1

Query: 16  IQGAAYNESGRLWTAKDIGLTDRKCAWMPQGFMSVNTKLGAGRAFLRSLHQQYAECGVDF 195
           ++G AY ESGR W AKDIG+ +R C WM  GFMSVNTKLGAG+AFLRSL++QYAE GVDF
Sbjct: 163 VKGGAYEESGRQWRAKDIGIKERACVWMSHGFMSVNTKLGAGKAFLRSLYRQYAEWGVDF 222

Query: 196 VKHD 207
           +KHD
Sbjct: 223 IKHD 226


Top