BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037468
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]         55   6e-06
ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea ma...    55   6e-06

>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -3

Query: 277 IRASMDKRGIKKSVPGCSMIEVDGIVHEFSVQGSPEAKMKEVEWILTSISGEIK 116
           IR  M ++ I+K +PGCSMIE++G V EFS  GS E  MKE+  +L  +S E+K
Sbjct: 486 IRNIMKEKRIEKKIPGCSMIEINGEVQEFSAGGSSELPMKELVLVLNGLSNEMK 539


>gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
          Length = 619

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = -3

Query: 277 IRASMDKRGIKKSVPGCSMIEVDGIVHEFSVQGSPEAKMKEVEWILTSISGEIKRGGDTL 98
           IR  M KRGIKK VPGCS++E+DG VHEF        + KE+  ++  ++ E++R G   
Sbjct: 472 IRREMSKRGIKK-VPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHIS 530

Query: 97  SGNLELID 74
           + +  L+D
Sbjct: 531 ATSEVLLD 538


>ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea mays]
           gi|219884839|gb|ACL52794.1| unknown [Zea mays]
          Length = 318

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = -3

Query: 277 IRASMDKRGIKKSVPGCSMIEVDGIVHEFSVQGSPEAKMKEVEWILTSISGEIKRGGDTL 98
           IR  M KRGIKK VPGCS++E+DG VHEF        + KE+  ++  ++ E++R G   
Sbjct: 171 IRREMSKRGIKK-VPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHIS 229

Query: 97  SGNLELID 74
           + +  L+D
Sbjct: 230 ATSEVLLD 237