BLASTX nr result

ID: Coptis24_contig00037452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037452
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   100   2e-19
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              100   2e-19
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]    93   3e-17
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm...    80   2e-13

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/102 (44%), Positives = 72/102 (70%)
 Frame = -1

Query: 307  NGIDAHKGNDCELISGIEDQKTKNVQLFLEKTLKPLFAELLHMSLHRESEVLSDIILMLG 128
            N  D    ++CE+ SG +DQ  K+  L +++ ++PLF+ELL +S  RE E+L DI++M+G
Sbjct: 967  NVADVGSDDECEIASGTDDQNIKSKVLLIKRCVRPLFSELLGLSFVREVEILCDIVMMIG 1026

Query: 127  NKLPFNIRNYNGAWALNLCRTTALEDPKTAKSLLALSVYLSS 2
            NKLP   RN++GAWA+ +C T+ + + K AK+L+ L++ LSS
Sbjct: 1027 NKLPCKWRNFHGAWAVRICNTSGITNSKVAKNLVDLAICLSS 1068


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/102 (44%), Positives = 72/102 (70%)
 Frame = -1

Query: 307  NGIDAHKGNDCELISGIEDQKTKNVQLFLEKTLKPLFAELLHMSLHRESEVLSDIILMLG 128
            N  D    ++CE+ SG +DQ  K+  L +++ ++PLF+ELL +S  RE E+L DI++M+G
Sbjct: 935  NVADVGSDDECEIASGTDDQNIKSKVLLIKRCVRPLFSELLGLSFVREVEILCDIVMMIG 994

Query: 127  NKLPFNIRNYNGAWALNLCRTTALEDPKTAKSLLALSVYLSS 2
            NKLP   RN++GAWA+ +C T+ + + K AK+L+ L++ LSS
Sbjct: 995  NKLPCKWRNFHGAWAVRICNTSGITNSKVAKNLVDLAICLSS 1036


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 11/113 (9%)
 Frame = -1

Query: 307  NGIDAHKGNDCELISGIEDQKTKNVQLFLEKTLKPLFAELLHMSLHRE-----------S 161
            N  D    ++CE+ SG +DQ  K+  L +++ ++PLF+ELL +S  RE           S
Sbjct: 977  NVADVGSDDECEIASGTDDQNIKSKVLLIKRCVRPLFSELLGLSFLREVEQSHLKRFVSS 1036

Query: 160  EVLSDIILMLGNKLPFNIRNYNGAWALNLCRTTALEDPKTAKSLLALSVYLSS 2
            ++L DI++M+GNKLP   RN++GAWA+ +C T+ + + K AK+L+ L++ LSS
Sbjct: 1037 QILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAKNLVDLAICLSS 1089


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/91 (43%), Positives = 66/91 (72%)
 Frame = -1

Query: 274  ELISGIEDQKTKNVQLFLEKTLKPLFAELLHMSLHRESEVLSDIILMLGNKLPFNIRNYN 95
            E  S I+DQ  +  +LF+ K LKPLF+ELL  S   E E++SD++L++G KLP   RN +
Sbjct: 991  EEASRIDDQHIRIKELFVVKVLKPLFSELLAQSYFHELEIISDMLLVIGEKLPRKQRNSH 1050

Query: 94   GAWALNLCRTTALEDPKTAKSLLALSVYLSS 2
            GAW++++C++  +++ K A+S++AL++ LSS
Sbjct: 1051 GAWSIHVCKSNVIKNSKAARSVVALAISLSS 1081


>ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis]
            gi|223544035|gb|EEF45561.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1357

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/91 (43%), Positives = 61/91 (67%)
 Frame = -1

Query: 274  ELISGIEDQKTKNVQLFLEKTLKPLFAELLHMSLHRESEVLSDIILMLGNKLPFNIRNYN 95
            E  S I+D + +   L + K L+PLFAELL  S   E E+L DI+LM+G+KLP   RN +
Sbjct: 940  EEASRIDDHQIRIKVLLIVKILRPLFAELLAQSSFNEIEILCDIMLMVGDKLPSKWRNSS 999

Query: 94   GAWALNLCRTTALEDPKTAKSLLALSVYLSS 2
            G+W +N+C++  + + K A+S+ AL++ LSS
Sbjct: 1000 GSWGINVCKSHGIRNSKVARSVAALAISLSS 1030


Top