BLASTX nr result

ID: Coptis24_contig00037403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037403
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]                 270   1e-70
ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2...   237   8e-61
ref|XP_002281346.2| PREDICTED: protein VERNALIZATION INSENSITIVE...   236   1e-60
emb|CBI28103.3| unnamed protein product [Vitis vinifera]              236   1e-60
emb|CAN81221.1| hypothetical protein VITISV_003834 [Vitis vinifera]   236   1e-60

>gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]
          Length = 696

 Score =  270 bits (689), Expect = 1e-70
 Identities = 140/184 (76%), Positives = 156/184 (84%)
 Frame = +2

Query: 2   ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPLDSLPAACRFQFEELTSSSLVI 181
           ARGIVSRLSVAGDV KLC+LAI KADAWL+TI++AA+ +DS PAACRFQFEELTSSSLVI
Sbjct: 269 ARGIVSRLSVAGDVLKLCSLAIEKADAWLNTIANAADLMDSHPAACRFQFEELTSSSLVI 328

Query: 182 VLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFRIVS 361
           VL++  SASS+ IKGYKLWYC+SR+E   KEPICVFP AQRRILISNLQPCTEY FRIVS
Sbjct: 329 VLKEPSSASSDAIKGYKLWYCQSRNESHAKEPICVFPRAQRRILISNLQPCTEYNFRIVS 388

Query: 362 YTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVGSSSTKREPKFTEAVGSS 541
           Y+E+GDLGHSEAKCFTKSVEI+ K  D  E  + K+      G SSTKREPK TEAVGSS
Sbjct: 389 YSEAGDLGHSEAKCFTKSVEILLKHPDSAEEFNPKI---CFYGGSSTKREPKLTEAVGSS 445

Query: 542 GFKV 553
           GFKV
Sbjct: 446 GFKV 449


>ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score =  237 bits (605), Expect = 8e-61
 Identities = 127/185 (68%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2   ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPLDSLPAACRFQFEELTSSSLVI 181
           ARGIVSRLSVAGDVQKLC+LAI KAD WL+TIS      DSLPAACRF FEE+ SSS+VI
Sbjct: 288 ARGIVSRLSVAGDVQKLCSLAIEKADEWLTTISK-----DSLPAACRFLFEEVKSSSVVI 342

Query: 182 VLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFRIVS 361
           +L ++  ASS  IKGYKLWYCKSR+E   KEPICVFP +QRRILISNLQPCTEYTFRIVS
Sbjct: 343 ILIELSIASSADIKGYKLWYCKSREETHAKEPICVFPRSQRRILISNLQPCTEYTFRIVS 402

Query: 362 YTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEAVGS 538
           YTE+GDLGHSEAKCFTKS+EIIHK  + +   + K E     G +SS  R+ +    V S
Sbjct: 403 YTEAGDLGHSEAKCFTKSIEIIHKNPNPSVARNSKKENTITGGCTSSYNRDSETATGVNS 462

Query: 539 SGFKV 553
           SGFKV
Sbjct: 463 SGFKV 467


>ref|XP_002281346.2| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 711

 Score =  236 bits (603), Expect = 1e-60
 Identities = 128/189 (67%), Positives = 149/189 (78%), Gaps = 5/189 (2%)
 Frame = +2

Query: 2   ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPL---DSLPAACRFQFEELTSSS 172
           ARGIVSRLS+AGDVQKLC+LAI KAD WL ++S+  NP    DSLPAACRF FEE+TSSS
Sbjct: 288 ARGIVSRLSIAGDVQKLCSLAIEKADEWLGSVSNK-NPNSREDSLPAACRFLFEEVTSSS 346

Query: 173 LVIVLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFR 352
           +VIVL ++   S + I+GYKLWYCKSR+E  QKEPIC  P  QRR+LISNLQPCTEY+FR
Sbjct: 347 IVIVLVELSVLSPDNIEGYKLWYCKSREETHQKEPICFIPKTQRRVLISNLQPCTEYSFR 406

Query: 353 IVSYTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEA 529
           I+SYT+SGDLGHSEAKCFTKSVEII+K S+ T   + + E P + G SSS KREPK T A
Sbjct: 407 IISYTKSGDLGHSEAKCFTKSVEIIYKSSNSTIMQNGEKENPPIEGNSSSAKREPKNTTA 466

Query: 530 VGSS-GFKV 553
             SS  FKV
Sbjct: 467 AESSPDFKV 475


>emb|CBI28103.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  236 bits (603), Expect = 1e-60
 Identities = 128/189 (67%), Positives = 149/189 (78%), Gaps = 5/189 (2%)
 Frame = +2

Query: 2   ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPL---DSLPAACRFQFEELTSSS 172
           ARGIVSRLS+AGDVQKLC+LAI KAD WL ++S+  NP    DSLPAACRF FEE+TSSS
Sbjct: 218 ARGIVSRLSIAGDVQKLCSLAIEKADEWLGSVSNK-NPNSREDSLPAACRFLFEEVTSSS 276

Query: 173 LVIVLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFR 352
           +VIVL ++   S + I+GYKLWYCKSR+E  QKEPIC  P  QRR+LISNLQPCTEY+FR
Sbjct: 277 IVIVLVELSVLSPDNIEGYKLWYCKSREETHQKEPICFIPKTQRRVLISNLQPCTEYSFR 336

Query: 353 IVSYTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEA 529
           I+SYT+SGDLGHSEAKCFTKSVEII+K S+ T   + + E P + G SSS KREPK T A
Sbjct: 337 IISYTKSGDLGHSEAKCFTKSVEIIYKSSNSTIMQNGEKENPPIEGNSSSAKREPKNTTA 396

Query: 530 VGSS-GFKV 553
             SS  FKV
Sbjct: 397 AESSPDFKV 405


>emb|CAN81221.1| hypothetical protein VITISV_003834 [Vitis vinifera]
          Length = 707

 Score =  236 bits (603), Expect = 1e-60
 Identities = 128/189 (67%), Positives = 149/189 (78%), Gaps = 5/189 (2%)
 Frame = +2

Query: 2   ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPL---DSLPAACRFQFEELTSSS 172
           ARGIVSRLS+AGDVQKLC+LAI KAD WL ++S+  NP    DSLPAACRF FEE+TSSS
Sbjct: 288 ARGIVSRLSIAGDVQKLCSLAIEKADEWLGSVSNK-NPNSREDSLPAACRFLFEEVTSSS 346

Query: 173 LVIVLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFR 352
           +VIVL ++   S + I+GYKLWYCKSR+E  QKEPIC  P  QRR+LISNLQPCTEY+FR
Sbjct: 347 IVIVLVELSVLSPDNIEGYKLWYCKSREETHQKEPICFIPKTQRRVLISNLQPCTEYSFR 406

Query: 353 IVSYTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEA 529
           I+SYT+SGDLGHSEAKCFTKSVEII+K S+ T   + + E P + G SSS KREPK T A
Sbjct: 407 IISYTKSGDLGHSEAKCFTKSVEIIYKSSNSTIMQNGEKENPPIEGNSSSAKREPKNTTA 466

Query: 530 VGSS-GFKV 553
             SS  FKV
Sbjct: 467 AESSPDFKV 475


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