BLASTX nr result
ID: Coptis24_contig00037403
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037403 (554 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea] 270 1e-70 ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2... 237 8e-61 ref|XP_002281346.2| PREDICTED: protein VERNALIZATION INSENSITIVE... 236 1e-60 emb|CBI28103.3| unnamed protein product [Vitis vinifera] 236 1e-60 emb|CAN81221.1| hypothetical protein VITISV_003834 [Vitis vinifera] 236 1e-60 >gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea] Length = 696 Score = 270 bits (689), Expect = 1e-70 Identities = 140/184 (76%), Positives = 156/184 (84%) Frame = +2 Query: 2 ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPLDSLPAACRFQFEELTSSSLVI 181 ARGIVSRLSVAGDV KLC+LAI KADAWL+TI++AA+ +DS PAACRFQFEELTSSSLVI Sbjct: 269 ARGIVSRLSVAGDVLKLCSLAIEKADAWLNTIANAADLMDSHPAACRFQFEELTSSSLVI 328 Query: 182 VLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFRIVS 361 VL++ SASS+ IKGYKLWYC+SR+E KEPICVFP AQRRILISNLQPCTEY FRIVS Sbjct: 329 VLKEPSSASSDAIKGYKLWYCQSRNESHAKEPICVFPRAQRRILISNLQPCTEYNFRIVS 388 Query: 362 YTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVGSSSTKREPKFTEAVGSS 541 Y+E+GDLGHSEAKCFTKSVEI+ K D E + K+ G SSTKREPK TEAVGSS Sbjct: 389 YSEAGDLGHSEAKCFTKSVEILLKHPDSAEEFNPKI---CFYGGSSTKREPKLTEAVGSS 445 Query: 542 GFKV 553 GFKV Sbjct: 446 GFKV 449 >ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1| predicted protein [Populus trichocarpa] Length = 717 Score = 237 bits (605), Expect = 8e-61 Identities = 127/185 (68%), Positives = 144/185 (77%), Gaps = 1/185 (0%) Frame = +2 Query: 2 ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPLDSLPAACRFQFEELTSSSLVI 181 ARGIVSRLSVAGDVQKLC+LAI KAD WL+TIS DSLPAACRF FEE+ SSS+VI Sbjct: 288 ARGIVSRLSVAGDVQKLCSLAIEKADEWLTTISK-----DSLPAACRFLFEEVKSSSVVI 342 Query: 182 VLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFRIVS 361 +L ++ ASS IKGYKLWYCKSR+E KEPICVFP +QRRILISNLQPCTEYTFRIVS Sbjct: 343 ILIELSIASSADIKGYKLWYCKSREETHAKEPICVFPRSQRRILISNLQPCTEYTFRIVS 402 Query: 362 YTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEAVGS 538 YTE+GDLGHSEAKCFTKS+EIIHK + + + K E G +SS R+ + V S Sbjct: 403 YTEAGDLGHSEAKCFTKSIEIIHKNPNPSVARNSKKENTITGGCTSSYNRDSETATGVNS 462 Query: 539 SGFKV 553 SGFKV Sbjct: 463 SGFKV 467 >ref|XP_002281346.2| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 711 Score = 236 bits (603), Expect = 1e-60 Identities = 128/189 (67%), Positives = 149/189 (78%), Gaps = 5/189 (2%) Frame = +2 Query: 2 ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPL---DSLPAACRFQFEELTSSS 172 ARGIVSRLS+AGDVQKLC+LAI KAD WL ++S+ NP DSLPAACRF FEE+TSSS Sbjct: 288 ARGIVSRLSIAGDVQKLCSLAIEKADEWLGSVSNK-NPNSREDSLPAACRFLFEEVTSSS 346 Query: 173 LVIVLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFR 352 +VIVL ++ S + I+GYKLWYCKSR+E QKEPIC P QRR+LISNLQPCTEY+FR Sbjct: 347 IVIVLVELSVLSPDNIEGYKLWYCKSREETHQKEPICFIPKTQRRVLISNLQPCTEYSFR 406 Query: 353 IVSYTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEA 529 I+SYT+SGDLGHSEAKCFTKSVEII+K S+ T + + E P + G SSS KREPK T A Sbjct: 407 IISYTKSGDLGHSEAKCFTKSVEIIYKSSNSTIMQNGEKENPPIEGNSSSAKREPKNTTA 466 Query: 530 VGSS-GFKV 553 SS FKV Sbjct: 467 AESSPDFKV 475 >emb|CBI28103.3| unnamed protein product [Vitis vinifera] Length = 607 Score = 236 bits (603), Expect = 1e-60 Identities = 128/189 (67%), Positives = 149/189 (78%), Gaps = 5/189 (2%) Frame = +2 Query: 2 ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPL---DSLPAACRFQFEELTSSS 172 ARGIVSRLS+AGDVQKLC+LAI KAD WL ++S+ NP DSLPAACRF FEE+TSSS Sbjct: 218 ARGIVSRLSIAGDVQKLCSLAIEKADEWLGSVSNK-NPNSREDSLPAACRFLFEEVTSSS 276 Query: 173 LVIVLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFR 352 +VIVL ++ S + I+GYKLWYCKSR+E QKEPIC P QRR+LISNLQPCTEY+FR Sbjct: 277 IVIVLVELSVLSPDNIEGYKLWYCKSREETHQKEPICFIPKTQRRVLISNLQPCTEYSFR 336 Query: 353 IVSYTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEA 529 I+SYT+SGDLGHSEAKCFTKSVEII+K S+ T + + E P + G SSS KREPK T A Sbjct: 337 IISYTKSGDLGHSEAKCFTKSVEIIYKSSNSTIMQNGEKENPPIEGNSSSAKREPKNTTA 396 Query: 530 VGSS-GFKV 553 SS FKV Sbjct: 397 AESSPDFKV 405 >emb|CAN81221.1| hypothetical protein VITISV_003834 [Vitis vinifera] Length = 707 Score = 236 bits (603), Expect = 1e-60 Identities = 128/189 (67%), Positives = 149/189 (78%), Gaps = 5/189 (2%) Frame = +2 Query: 2 ARGIVSRLSVAGDVQKLCALAIAKADAWLSTISDAANPL---DSLPAACRFQFEELTSSS 172 ARGIVSRLS+AGDVQKLC+LAI KAD WL ++S+ NP DSLPAACRF FEE+TSSS Sbjct: 288 ARGIVSRLSIAGDVQKLCSLAIEKADEWLGSVSNK-NPNSREDSLPAACRFLFEEVTSSS 346 Query: 173 LVIVLRDILSASSEVIKGYKLWYCKSRDEPDQKEPICVFPSAQRRILISNLQPCTEYTFR 352 +VIVL ++ S + I+GYKLWYCKSR+E QKEPIC P QRR+LISNLQPCTEY+FR Sbjct: 347 IVIVLVELSVLSPDNIEGYKLWYCKSREETHQKEPICFIPKTQRRVLISNLQPCTEYSFR 406 Query: 353 IVSYTESGDLGHSEAKCFTKSVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEA 529 I+SYT+SGDLGHSEAKCFTKSVEII+K S+ T + + E P + G SSS KREPK T A Sbjct: 407 IISYTKSGDLGHSEAKCFTKSVEIIYKSSNSTIMQNGEKENPPIEGNSSSAKREPKNTTA 466 Query: 530 VGSS-GFKV 553 SS FKV Sbjct: 467 AESSPDFKV 475