BLASTX nr result

ID: Coptis24_contig00037399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037399
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267...   157   1e-36
emb|CBI16355.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
ref|XP_002513492.1| conserved hypothetical protein [Ricinus comm...   154   9e-36
ref|XP_003607377.1| hypothetical protein MTR_4g077160 [Medicago ...   152   2e-35

>ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267248 [Vitis vinifera]
          Length = 507

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/145 (53%), Positives = 102/145 (70%)
 Frame = +3

Query: 18  HKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQMQEMLERVRDEMEDLQCSRVFWQD 197
           H+E +  E+  CSGRCK IVR+I+EQVR E EQWSQMQEMLE+VR+EME+L  SR FW+D
Sbjct: 306 HQETVSHEEHGCSGRCKVIVRRIMEQVRTETEQWSQMQEMLEQVREEMEELNASRDFWED 365

Query: 198 RALDSDDHVQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTRIPR 377
           RALDS+  +Q LHS V+EWK KA SS  K   L+ ++  L+ E+  L+ ++ KE TR   
Sbjct: 366 RALDSECLIQYLHSDVEEWKQKALSSNDKANELQAQVFILSEEINNLRKEQNKEATR--T 423

Query: 378 ETQNEKEKHVLICRLKENLHSGNKN 452
             QNE +K +L+C +KEN H  N N
Sbjct: 424 TAQNETDKRLLVCHMKEN-HQANSN 447


>emb|CBI16355.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/145 (53%), Positives = 102/145 (70%)
 Frame = +3

Query: 18  HKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQMQEMLERVRDEMEDLQCSRVFWQD 197
           H+E +  E+  CSGRCK IVR+I+EQVR E EQWSQMQEMLE+VR+EME+L  SR FW+D
Sbjct: 321 HQETVSHEEHGCSGRCKVIVRRIMEQVRTETEQWSQMQEMLEQVREEMEELNASRDFWED 380

Query: 198 RALDSDDHVQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTRIPR 377
           RALDS+  +Q LHS V+EWK KA SS  K   L+ ++  L+ E+  L+ ++ KE TR   
Sbjct: 381 RALDSECLIQYLHSDVEEWKQKALSSNDKANELQAQVFILSEEINNLRKEQNKEATR--T 438

Query: 378 ETQNEKEKHVLICRLKENLHSGNKN 452
             QNE +K +L+C +KEN H  N N
Sbjct: 439 TAQNETDKRLLVCHMKEN-HQANSN 462


>ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|222849752|gb|EEE87299.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/143 (54%), Positives = 104/143 (72%), Gaps = 6/143 (4%)
 Frame = +3

Query: 36  REDKMCSGRCKKIVRKIVEQVRAEMEQWSQMQEMLERVRDEMEDLQCSRVFWQDRALDSD 215
           +E+K CSG CK IVR ++EQV+AE EQWSQMQEML +VR+EME+LQ SR FW+DRALDSD
Sbjct: 302 KEEKTCSGCCKIIVRSVIEQVQAETEQWSQMQEMLGQVRNEMEELQASRDFWEDRALDSD 361

Query: 216 DHVQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTR------IPR 377
             +QSL+S+VQEW+ KA SS+ K   L+ ++  L  E+ RL+ ++ KE +R      I  
Sbjct: 362 CQIQSLNSAVQEWRQKALSSEAKANELQNQVAVLQEELERLRKERVKETSRSKNLPSISL 421

Query: 378 ETQNEKEKHVLICRLKENLHSGN 446
           E  NE EK VL+CRLKEN ++ +
Sbjct: 422 EAPNETEKRVLVCRLKENRNTND 444


>ref|XP_002513492.1| conserved hypothetical protein [Ricinus communis]
           gi|223547400|gb|EEF48895.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 527

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/141 (56%), Positives = 102/141 (72%), Gaps = 6/141 (4%)
 Frame = +3

Query: 39  EDKMCSGRCKKIVRKIVEQVRAEMEQWSQMQEMLERVRDEMEDLQCSRVFWQDRALDSDD 218
           E++ CSG CK IVR++VEQVRAE EQWSQMQEML +VR EME+LQ SR FW+DRALDSD 
Sbjct: 315 EERPCSGGCKAIVRRVVEQVRAETEQWSQMQEMLGQVRHEMEELQVSRDFWEDRALDSDY 374

Query: 219 HVQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDKKKKECTRIPR------E 380
            +QSL S+V+EWK KA SS++K + L+ +   L+ E+  LK +K KE +R         +
Sbjct: 375 QIQSLQSAVKEWKLKALSSESKASELQAQASMLSAELEGLKKEKAKERSRSKNLAPNSYD 434

Query: 381 TQNEKEKHVLICRLKENLHSG 443
           + NE EK VL+CRLKEN H G
Sbjct: 435 SPNEMEKRVLVCRLKENHHHG 455


>ref|XP_003607377.1| hypothetical protein MTR_4g077160 [Medicago truncatula]
           gi|355508432|gb|AES89574.1| hypothetical protein
           MTR_4g077160 [Medicago truncatula]
          Length = 502

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/150 (50%), Positives = 104/150 (69%), Gaps = 4/150 (2%)
 Frame = +3

Query: 18  HKENIFREDKMCSGRCKKIVRKIVEQVRAEMEQWSQMQEMLERVRDEMEDLQCSRVFWQD 197
           H+EN+  E  +CSG CK IVR+IVEQVR E EQWSQMQEML +VR+EME+LQ SR FW+D
Sbjct: 286 HQENLSCEANLCSGHCKTIVRRIVEQVRVETEQWSQMQEMLGQVREEMEELQASRDFWKD 345

Query: 198 RALDSDDHVQSLHSSVQEWKHKANSSQTKVTHLEKKIKELNLEVGRLKDK----KKKECT 365
           RAL SD  +QSLH+ VQEWK +A SS++K   +E K+  L ++  + +++    K  +C 
Sbjct: 346 RALHSDSQIQSLHNDVQEWKQRALSSESKKNEIEAKLSMLCVDFEKFQNEQNVVKGTKCP 405

Query: 366 RIPRETQNEKEKHVLICRLKENLHSGNKNK 455
            +P +TQ E EK ++IC  KE   +  +N+
Sbjct: 406 PVPLDTQKEFEKRIVICSSKEKSSNVTENR 435


Top