BLASTX nr result

ID: Coptis24_contig00037393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037393
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524237.1| Disease resistance protein RPP8, putative [R...    96   2e-18
ref|XP_002528440.1| Disease resistance protein RPP8, putative [R...    96   2e-18
ref|XP_003635117.1| PREDICTED: probable disease resistance prote...    96   4e-18
emb|CBI17689.3| unnamed protein product [Vitis vinifera]               96   4e-18
emb|CAN61050.1| hypothetical protein VITISV_023621 [Vitis vinifera]    96   4e-18

>ref|XP_002524237.1| Disease resistance protein RPP8, putative [Ricinus communis]
            gi|223536514|gb|EEF38161.1| Disease resistance protein
            RPP8, putative [Ricinus communis]
          Length = 857

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 58/118 (49%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = -1

Query: 342  FQDLSQLSCCHRLLKLYLWGRI-----EVHHP-DVFPPTLIKLTLHASQLEQDPMETLGK 181
            F +   L  CH+L K+ L G+I      +HH  +  PP+L KLTL  SQL QDPM  L K
Sbjct: 682  FPNFKPLCHCHQLTKVKLEGKIAEDVRSLHHSLEYLPPSLAKLTLCRSQLRQDPMPILEK 741

Query: 180  LPNLVSLKLQRNAYKGKGMVCTAKGFPRLQTFRLLGLYELEEWTVVEGAMPTFIHLEI 7
            LPNL  L L+   YKG  MVC+A GFP+L+  +L  L +LEEW V EGAMP    L+I
Sbjct: 742  LPNLRFLSLE-GTYKGPVMVCSAYGFPQLEVVKLGWLDKLEEWMVEEGAMPCLRTLDI 798


>ref|XP_002528440.1| Disease resistance protein RPP8, putative [Ricinus communis]
            gi|223532116|gb|EEF33923.1| Disease resistance protein
            RPP8, putative [Ricinus communis]
          Length = 920

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/112 (48%), Positives = 69/112 (61%)
 Frame = -1

Query: 342  FQDLSQLSCCHRLLKLYLWGRIEVHHPDVFPPTLIKLTLHASQLEQDPMETLGKLPNLVS 163
            F +L  LS C  L KL + G+I   + +  P TL KLTL AS+L+QDPM  L KLPNL  
Sbjct: 750  FSNLESLSHCQYLNKLKILGKILDGNLEYLPITLSKLTLFASKLQQDPMAVLEKLPNLTF 809

Query: 162  LKLQRNAYKGKGMVCTAKGFPRLQTFRLLGLYELEEWTVVEGAMPTFIHLEI 7
            L L  ++Y G  MVC+  GFP L+   + GL +L+EW V EGAMP+   L I
Sbjct: 810  LHLGEDSYNGSKMVCSVNGFPCLEILEITGL-DLQEWEVTEGAMPSLRMLYI 860


>ref|XP_003635117.1| PREDICTED: probable disease resistance protein RDL6/RF9-like [Vitis
            vinifera]
          Length = 1359

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
 Frame = -1

Query: 336  DLSQLSCCHRLLKLYLWGRIEVHHPDV---FPPTLIKLTLHASQLEQDPMETLGKLPNLV 166
            DL  L+    L  LYL GR++  +P V   FP +LI+LTL  S+LE+DPM+TL KLPNL 
Sbjct: 1212 DLKPLAHHVNLSCLYLLGRLK--NPSVGSEFPHSLIELTLSGSELEEDPMQTLDKLPNLK 1269

Query: 165  SLKLQRNAYKGKGMVCTAKGFPRLQTFRLLGLYELEEWTVVEGAMPTFIHLEI 7
             L+   N+Y GK M C++ GFP+LQ  +L  L +LEEW V EGA+     L+I
Sbjct: 1270 VLRFLANSYLGKNMGCSSGGFPQLQVLKLWKLEQLEEWNVDEGALQALWDLDI 1322


>emb|CBI17689.3| unnamed protein product [Vitis vinifera]
          Length = 1312

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
 Frame = -1

Query: 336  DLSQLSCCHRLLKLYLWGRIEVHHPDV---FPPTLIKLTLHASQLEQDPMETLGKLPNLV 166
            DL  L+    L  LYL GR++  +P V   FP +LI+LTL  S+LE+DPM+TL KLPNL 
Sbjct: 1165 DLKPLAHHVNLSCLYLLGRLK--NPSVGSEFPHSLIELTLSGSELEEDPMQTLDKLPNLK 1222

Query: 165  SLKLQRNAYKGKGMVCTAKGFPRLQTFRLLGLYELEEWTVVEGAMPTFIHLEI 7
             L+   N+Y GK M C++ GFP+LQ  +L  L +LEEW V EGA+     L+I
Sbjct: 1223 VLRFLANSYLGKNMGCSSGGFPQLQVLKLWKLEQLEEWNVDEGALQALWDLDI 1275


>emb|CAN61050.1| hypothetical protein VITISV_023621 [Vitis vinifera]
          Length = 1450

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
 Frame = -1

Query: 336  DLSQLSCCHRLLKLYLWGRIEVHHPDV---FPPTLIKLTLHASQLEQDPMETLGKLPNLV 166
            DL  L+    L  LYL GR++  +P V   FP +LI+LTL  S+LE+DPM+TL KLPNL 
Sbjct: 1212 DLKPLAHHVNLSCLYLLGRLK--NPSVGSXFPHSLIELTLSGSELEEDPMQTLDKLPNLK 1269

Query: 165  SLKLQRNAYKGKGMVCTAKGFPRLQTFRLLGLYELEEWTVVEGAMPTFIHLEI 7
             L+   N+Y GK M C++ GFP+LQ  +L  L +LEEW V EGA+     L+I
Sbjct: 1270 VLRFLANSYLGKNMGCSSGGFPQLQVLKLWKLEQLEEWNVDEGALQALWDLDI 1322


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