BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037379
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]              167   6e-40
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22
emb|CBI38763.3| unnamed protein product [Vitis vinifera]              108   3e-22
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]   108   3e-22

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/109 (72%), Positives = 92/109 (84%)
 Frame = -2

Query: 327  SDQILTEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLS 148
            SD+   +++S+KL E+E  MEE+GYVAD+NHLLHNAEEE Y+GVGLHHTEMKALAFGL+S
Sbjct: 815  SDENPAKEVSAKLAEIEGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLIS 874

Query: 147  LPQGMPIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSGK 1
            LP GMP+RV K VRMCGDCHSA KF+S FL RELVVKD  +FHHF  GK
Sbjct: 875  LPHGMPVRVVKNVRMCGDCHSACKFMSTFLERELVVKDPYSFHHFRDGK 923


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 906

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/109 (72%), Positives = 92/109 (84%)
 Frame = -2

Query: 327  SDQILTEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLS 148
            SD+   +++S+KL E+E  MEE+GYVAD+NHLLHNAEEE Y+GVGLHHTEMKALAFGL+S
Sbjct: 791  SDENPAKEVSAKLAEIEGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLIS 850

Query: 147  LPQGMPIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSGK 1
            LP GMP+RV K VRMCGDCHSA KF+S FL RELVVKD  +FHHF  GK
Sbjct: 851  LPHGMPVRVVKNVRMCGDCHSACKFMSTFLERELVVKDPYSFHHFRDGK 899


>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/103 (47%), Positives = 73/103 (70%)
 Frame = -2

Query: 312 TEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGM 133
           T +I SK+ E+ I ++E GYV D N  LH+ +EEG E    +H+E  A+AFGLL++P G 
Sbjct: 676 TAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGA 735

Query: 132 PIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSG 4
           PIR+FK +R+CGDCH+A K++S   +R ++++D + FHHF  G
Sbjct: 736 PIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREG 778


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/103 (47%), Positives = 73/103 (70%)
 Frame = -2

Query: 312 TEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGM 133
           T +I SK+ E+ I ++E GYV D N  LH+ +EEG E    +H+E  A+AFGLL++P G 
Sbjct: 609 TAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGA 668

Query: 132 PIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSG 4
           PIR+FK +R+CGDCH+A K++S   +R ++++D + FHHF  G
Sbjct: 669 PIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREG 711


>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/103 (47%), Positives = 73/103 (70%)
 Frame = -2

Query: 312 TEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGM 133
           T +I SK+ E+ I ++E GYV D N  LH+ +EEG E    +H+E  A+AFGLL++P G 
Sbjct: 330 TAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGA 389

Query: 132 PIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSG 4
           PIR+FK +R+CGDCH+A K++S   +R ++++D + FHHF  G
Sbjct: 390 PIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREG 432