BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037378
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease ...    84   9e-15
ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]    84   9e-15
ref|XP_002522300.1| exonuclease, putative [Ricinus communis] gi|...    83   2e-14
ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera]     76   2e-12
ref|XP_002890823.1| hypothetical protein ARALYDRAFT_473168 [Arab...    71   8e-11

>ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis
           sativus]
          Length = 685

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
 Frame = +1

Query: 31  ALFERTNLKSALTKRGRKTVPTKETQEAIGKVKHARADPSVP-----IDEMSTDKGKFGC 195
           A F   +  S +TKR  K  P +  Q    K KH   D   P     + E  T++GKFG 
Sbjct: 549 ASFISNSCDSTITKR--KASPNESIQMDNVKTKHLCKDTVQPDHDETVLETKTEEGKFGS 606

Query: 196 NISHLSHYSDVAEKSMEKFVSIVSTFRCTSSGSRASGLR 312
           NISHLSHYSD+AEKSME+FVS++S+FR  +SGSRASGLR
Sbjct: 607 NISHLSHYSDIAEKSMERFVSVISSFR-FASGSRASGLR 644


>ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
          Length = 685

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
 Frame = +1

Query: 31  ALFERTNLKSALTKRGRKTVPTKETQEAIGKVKHARADPSVP-----IDEMSTDKGKFGC 195
           A F   +  S +TKR  K  P +  Q    K KH   D   P     + E  T++GKFG 
Sbjct: 549 ASFISNSCDSTITKR--KASPNESIQMDNVKTKHLCKDTVQPDHDETVLETKTEEGKFGS 606

Query: 196 NISHLSHYSDVAEKSMEKFVSIVSTFRCTSSGSRASGLR 312
           NISHLSHYSD+AEKSME+FVS++S+FR  +SGSRASGLR
Sbjct: 607 NISHLSHYSDIAEKSMERFVSVISSFR-FASGSRASGLR 644


>ref|XP_002522300.1| exonuclease, putative [Ricinus communis]
           gi|223538553|gb|EEF40158.1| exonuclease, putative
           [Ricinus communis]
          Length = 629

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = +1

Query: 121 KVKHARADPSVPIDEMSTDKGKFGCNISHLSHYSDVAEKSMEKFVSIVSTFRCTSSGSRA 300
           + KH R D S     +S + GKFG NISHLSHYSD+AEKSME+FVS++S+F+ +SSGSRA
Sbjct: 532 RTKHMRTDAS-----LSENGGKFGSNISHLSHYSDIAEKSMERFVSVISSFKFSSSGSRA 586

Query: 301 SGLR 312
           SGLR
Sbjct: 587 SGLR 590


>ref|XP_002269417.2| PREDICTED: exonuclease 1-like [Vitis vinifera]
          Length = 658

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 8/100 (8%)
 Frame = +1

Query: 37  FERTNLKSALTKRGRKTVPT-------KETQEAIGKVKHARADPSVPIDEMSTDKG-KFG 192
           FE   LKSA+ KR   +V +       K  +        +  DP +    + T+ G KFG
Sbjct: 515 FENNYLKSAIMKRKPTSVDSIQPDVKAKYMRTNASLANRSNCDPDIDDTFIETEGGGKFG 574

Query: 193 CNISHLSHYSDVAEKSMEKFVSIVSTFRCTSSGSRASGLR 312
            NISHL HYSD+AEKSME+FVS++S+F   SSGSRASGLR
Sbjct: 575 SNISHLGHYSDIAEKSMERFVSVLSSFN-YSSGSRASGLR 613


>ref|XP_002890823.1| hypothetical protein ARALYDRAFT_473168 [Arabidopsis lyrata subsp.
           lyrata] gi|297336665|gb|EFH67082.1| hypothetical protein
           ARALYDRAFT_473168 [Arabidopsis lyrata subsp. lyrata]
          Length = 744

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
 Frame = +1

Query: 97  KETQEAIGKVKHARADPSVPIDEMST-----DKGKFGCNISHLSHYSDVAEKSMEKFVSI 261
           KE Q +    KH R D + P+    T     D  KFG NISH+ HYS++AEKS+E+FVS 
Sbjct: 632 KENQNS----KHMRMDETDPVLNAETPVETDDVEKFGSNISHIGHYSEIAEKSVERFVSA 687

Query: 262 VSTFRCTSSGSRASGLR 312
           +S+F+ + +GSRASGLR
Sbjct: 688 ISSFKYSGTGSRASGLR 704