BLASTX nr result

ID: Coptis24_contig00037377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037377
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514878.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
gb|ABK93232.1| unknown [Populus trichocarpa]                          104   8e-21
ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|XP_002514878.1| conserved hypothetical protein [Ricinus communis]
           gi|223545929|gb|EEF47432.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/120 (48%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
 Frame = +1

Query: 19  TQFLKALILYCST--ALICSILCLSPFWLPSLYASIKAFLFVSVPNFGVLFINPKCLFIV 192
           TQFL  LI++  +  AL CS+ C  P+W PSLY+SIK F F+S+PN      +PKCLF+V
Sbjct: 18  TQFLHNLIIHLLSVIALTCSVFCFYPYWFPSLYSSIKEFQFLSLPNTCTSIFSPKCLFVV 77

Query: 193 SNVIVILLIGESKFLSS-KSSPDTEIYDEYVKRSSSLRRHPCSEEIEVKETKLEVCLVEE 369
            N+IV+ L+GESK + S  SSP  +IYDEYV+RS SLR      + +  ++KL++ L E+
Sbjct: 78  VNIIVVFLVGESKLVGSHSSSPTNKIYDEYVQRSRSLRGISTLLQEKAVQSKLDLNLDED 137


>gb|ABK93232.1| unknown [Populus trichocarpa]
          Length = 203

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
 Frame = +1

Query: 7   KKSSTQFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFVSVPNFGVLFINPKCLF 186
           K    Q L    LY  T L C++ C SPFW PSL+ S+K FLFVS+P    + ++PK +F
Sbjct: 14  KSKKHQLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVSLPKLSSILLSPKFIF 73

Query: 187 IVSNVIVILLIGESKFLSSKSSPDTEI-YDEYVKRSSSLRRHPCSEEIEVKETKLEVCLV 363
           IV N+I+ +L+GESK+ +S S   T++ YDEY+ +  SL+    S E E KE K+E    
Sbjct: 74  IVGNLIIFVLVGESKYFTSNSPSATDVYYDEYIDQKKSLQTTSASVE-EKKEVKMEESFK 132

Query: 364 EE 369
           E+
Sbjct: 133 EK 134


>ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|222845111|gb|EEE82658.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/94 (54%), Positives = 67/94 (71%)
 Frame = +1

Query: 22  QFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFVSVPNFGVLFINPKCLFIVSNV 201
           QF   L+ +   AL CS+LC SP W PSL +S+K FLF+S+PN    +  PKCLFI+ NV
Sbjct: 19  QFYYNLMFHSFLALTCSLLCSSPLWFPSLCSSMKHFLFLSLPNKLSSYFGPKCLFILVNV 78

Query: 202 IVILLIGESKFLSSKSSPDTEIYDEYVKRSSSLR 303
           IV+ L+GES+ + S+SSP   IYD+YV+RS SLR
Sbjct: 79  IVVFLVGESRLVGSQSSPVGGIYDDYVERSRSLR 112


>ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|222868713|gb|EEF05844.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/122 (43%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
 Frame = +1

Query: 7   KKSSTQFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFVSVPNFGVLFINPKCLF 186
           K    Q L    LY  T L C++ C SPFW PSL+ S+K FLFVS+P    + ++PK +F
Sbjct: 14  KSKKHQLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVSLPKLSSILLSPKFIF 73

Query: 187 IVSNVIVILLIGESKFLSSKSSPDTEI-YDEYVKRSSSLRRHPCSEEIEVKETKLEVCLV 363
           IV N+I+ +L+GESK+ +S S   T + YDEY+ +  SL+    S E E KE K+E    
Sbjct: 74  IVGNLIIFVLVGESKYFTSNSPSATAVYYDEYIDQKKSLQTTSASVE-EKKEVKMEESFK 132

Query: 364 EE 369
           E+
Sbjct: 133 EK 134


>ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|222858818|gb|EEE96365.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = +1

Query: 7   KKSSTQFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFVSVPNFGVLFINPKCLF 186
           K    Q L    LY    L C++ C SPFW P L+ S+K FLF S P  G +F++PK +F
Sbjct: 14  KSKKHQLLDNFFLYSLIVLACTLFCSSPFWFPCLFDSVKLFLFGSPPKLGSVFLSPKFIF 73

Query: 187 IVSNVIVILLIGESKFLSSKSSPDTEI-YDEYVKRSSSLRRHPCSEEIEVKETKL 348
           IV N+I+ +L+GESKF ++ S P T++ YDEY+    SL+    S   + KET +
Sbjct: 74  IVGNLIIFVLVGESKFFTTNSPPATDVYYDEYIDHKRSLQ--TASSVEQKKETNM 126


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