BLASTX nr result

ID: Coptis24_contig00037375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037375
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...   154   9e-36
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like...   149   2e-34
ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like...   149   2e-34
emb|CBI25868.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like...   141   6e-32

>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
           gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
           [Medicago truncatula]
          Length = 984

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/93 (75%), Positives = 88/93 (94%)
 Frame = +3

Query: 3   IVDLLTSRIPTSLISGLIILNAHNITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSG 182
           IVDLLT+++PTS ISG++ILNAH+I++T TE+FIVRIFRSFN++AY+RAFSD+P +MVSG
Sbjct: 106 IVDLLTNKLPTSTISGMLILNAHSISETSTEAFIVRIFRSFNRDAYVRAFSDRPQAMVSG 165

Query: 183 FAKTERIIKCLGLKKLHLWPRFQVYVSQDLEKD 281
           FAK ER +KCLGL+KLHLWPRFQVYVSQ+LE+D
Sbjct: 166 FAKAERTMKCLGLRKLHLWPRFQVYVSQELERD 198


>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
          Length = 967

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/93 (73%), Positives = 86/93 (92%)
 Frame = +3

Query: 3   IVDLLTSRIPTSLISGLIILNAHNITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSG 182
           IVDLLT+++PTS I+G+IILNAH++++T TE+FIVRIFRS N+ AY+RAFSDKPH+MVSG
Sbjct: 106 IVDLLTNKLPTSKIAGIIILNAHSLSETSTEAFIVRIFRSLNRGAYVRAFSDKPHAMVSG 165

Query: 183 FAKTERIIKCLGLKKLHLWPRFQVYVSQDLEKD 281
           FAK ER +KCL ++KLHLWPRFQVYVSQ+LE+D
Sbjct: 166 FAKAERTMKCLHVRKLHLWPRFQVYVSQELERD 198


>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
          Length = 964

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/92 (76%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   IVDLLTSRIPTSLISGLIILNAHNITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSG 182
           IVDLLTSR+PTS I+GLIILNAH++++TCTE+FIVRI RS N  AY+RAFSDKPH+MVSG
Sbjct: 105 IVDLLTSRVPTSGIAGLIILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSG 164

Query: 183 FAKTERIIKCLGLKKLHLWPRFQVYVSQDLEK 278
           FAK ERI+KCL L++LHLWPRFQV+VSQ+LE+
Sbjct: 165 FAKAERIMKCLFLRRLHLWPRFQVHVSQELER 196


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/92 (76%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   IVDLLTSRIPTSLISGLIILNAHNITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSG 182
           IVDLLTSR+PTS I+GLIILNAH++++TCTE+FIVRI RS N  AY+RAFSDKPH+MVSG
Sbjct: 339 IVDLLTSRVPTSGIAGLIILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSG 398

Query: 183 FAKTERIIKCLGLKKLHLWPRFQVYVSQDLEK 278
           FAK ERI+KCL L++LHLWPRFQV+VSQ+LE+
Sbjct: 399 FAKAERIMKCLFLRRLHLWPRFQVHVSQELER 430


>ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus]
           gi|449505229|ref|XP_004162411.1| PREDICTED: DNA repair
           endonuclease UVH1-like [Cucumis sativus]
          Length = 1003

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/93 (69%), Positives = 84/93 (90%)
 Frame = +3

Query: 3   IVDLLTSRIPTSLISGLIILNAHNITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSG 182
           IVDLLT ++PTS I+GLIILNAH++++T TE+FIVRI RS N+NAY+R FSDKPH+MVSG
Sbjct: 109 IVDLLTHKLPTSNIAGLIILNAHSLSETSTEAFIVRIIRSHNRNAYVRVFSDKPHAMVSG 168

Query: 183 FAKTERIIKCLGLKKLHLWPRFQVYVSQDLEKD 281
           FAK ERI+KCL +++LHLWPRFQV VS++LE++
Sbjct: 169 FAKAERIMKCLYVRRLHLWPRFQVNVSEELERN 201


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