BLASTX nr result
ID: Coptis24_contig00037354
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037354 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522273.1| Carboxy-terminal domain RNA polymerase II po... 78 8e-13 ref|XP_004134627.1| PREDICTED: CTD small phosphatase-like protei... 77 1e-12 gb|ADN34024.1| carboxy-terminal domain RNA polymerase II polypep... 76 2e-12 ref|XP_004163350.1| PREDICTED: CTD small phosphatase-like protei... 75 5e-12 ref|XP_002264996.1| PREDICTED: CTD small phosphatase-like protei... 75 7e-12 >ref|XP_002522273.1| Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase, putative [Ricinus communis] gi|223538526|gb|EEF40131.1| Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase, putative [Ricinus communis] Length = 300 Score = 77.8 bits (190), Expect = 8e-13 Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 2/61 (3%) Frame = -2 Query: 250 DNPNAYVFQPENALPVLPFIDDFNDRELEKVIKFFENAEGVEDMRDAVKNYVSVE--EKK 77 DNPN Y FQP+NA+P+ PFIDD D EL K+ KFF +GVEDMR+AVK +V E KK Sbjct: 236 DNPNCYTFQPDNAIPIKPFIDDLRDGELGKLAKFFNGCDGVEDMRNAVKQFVCGEGDNKK 295 Query: 76 V 74 V Sbjct: 296 V 296 >ref|XP_004134627.1| PREDICTED: CTD small phosphatase-like protein-like [Cucumis sativus] Length = 274 Score = 77.0 bits (188), Expect = 1e-12 Identities = 34/56 (60%), Positives = 44/56 (78%) Frame = -2 Query: 250 DNPNAYVFQPENALPVLPFIDDFNDRELEKVIKFFENAEGVEDMRDAVKNYVSVEE 83 DNPNAYV+QPENA+P+ F+DD D EL K+++FFE + +DMRDAVK Y+S EE Sbjct: 218 DNPNAYVYQPENAIPITSFVDDPADTELRKLVRFFEVCDCYDDMRDAVKQYLSREE 273 >gb|ADN34024.1| carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase [Cucumis melo subsp. melo] Length = 275 Score = 76.3 bits (186), Expect = 2e-12 Identities = 34/56 (60%), Positives = 44/56 (78%) Frame = -2 Query: 250 DNPNAYVFQPENALPVLPFIDDFNDRELEKVIKFFENAEGVEDMRDAVKNYVSVEE 83 DNPNAYV+QPENA+P+ F+DD D EL K+++FFE + +DMRDAVK Y+S EE Sbjct: 219 DNPNAYVYQPENAIPIPSFVDDPADMELRKLVRFFEVCDCYDDMRDAVKQYLSREE 274 >ref|XP_004163350.1| PREDICTED: CTD small phosphatase-like protein-like [Cucumis sativus] Length = 273 Score = 75.1 bits (183), Expect = 5e-12 Identities = 33/55 (60%), Positives = 43/55 (78%) Frame = -2 Query: 250 DNPNAYVFQPENALPVLPFIDDFNDRELEKVIKFFENAEGVEDMRDAVKNYVSVE 86 DNPNAYV+QPENA+P+ F+DD D EL K+++FFE + +DMRDAVK Y+S E Sbjct: 218 DNPNAYVYQPENAIPITSFVDDPADTELRKLVRFFEVCDCYDDMRDAVKQYLSRE 272 >ref|XP_002264996.1| PREDICTED: CTD small phosphatase-like protein-like [Vitis vinifera] Length = 285 Score = 74.7 bits (182), Expect = 7e-12 Identities = 33/51 (64%), Positives = 40/51 (78%) Frame = -2 Query: 250 DNPNAYVFQPENALPVLPFIDDFNDRELEKVIKFFENAEGVEDMRDAVKNY 98 DNPNAY QPENA+P+ PFIDD D ELE +I+FFE + +DMRDAVK+Y Sbjct: 224 DNPNAYFLQPENAIPMPPFIDDLADGELENLIEFFEGCDSFKDMRDAVKHY 274