BLASTX nr result

ID: Coptis24_contig00037333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037333
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280832.1| PREDICTED: uncharacterized protein LOC100247...   225   3e-57
emb|CAN81983.1| hypothetical protein VITISV_042631 [Vitis vinifera]   225   3e-57
ref|XP_002319544.1| predicted protein [Populus trichocarpa] gi|2...   224   7e-57
ref|XP_002328440.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55
ref|XP_003591107.1| Glycogenin-1 [Medicago truncatula] gi|355480...   215   3e-54

>ref|XP_002280832.1| PREDICTED: uncharacterized protein LOC100247620 [Vitis vinifera]
           gi|296088322|emb|CBI36767.3| unnamed protein product
           [Vitis vinifera]
          Length = 546

 Score =  225 bits (573), Expect = 3e-57
 Identities = 100/149 (67%), Positives = 124/149 (83%)
 Frame = -3

Query: 448 WKIKDIKRIRNPQAQRGAYNEWNYSKLRIWQLTDYPQIIFIDSDLIVLENLDRFFAYPQL 269
           WKIK I+RIR+P A++ AYNEWNYSKLR+WQLT+Y +IIFID+D IVL N+D  F YPQL
Sbjct: 315 WKIKHIERIRSPNAKKNAYNEWNYSKLRLWQLTEYDKIIFIDADFIVLNNMDSLFVYPQL 374

Query: 268 SAAGNDKWLFNSGVMLIEPSDCVFKMLMKKMYTLSSYNGGDQGFLNEAFTWWHRLPTRLN 89
           SA GN++ LFNSG+M++EPS+C+F+ LM+K  T+ SYNGGDQGFLNE FTWWHR P RLN
Sbjct: 375 SAVGNNRVLFNSGIMVVEPSECMFQTLMEKSQTMVSYNGGDQGFLNEVFTWWHRWPRRLN 434

Query: 88  FLKIFEGVKDEEHNVPDSVYTIHYLGLKP 2
           FLKIF+  +  EH +P +VY IHYLG+KP
Sbjct: 435 FLKIFK--EKNEHEIPANVYAIHYLGVKP 461


>emb|CAN81983.1| hypothetical protein VITISV_042631 [Vitis vinifera]
          Length = 546

 Score =  225 bits (573), Expect = 3e-57
 Identities = 101/149 (67%), Positives = 123/149 (82%)
 Frame = -3

Query: 448 WKIKDIKRIRNPQAQRGAYNEWNYSKLRIWQLTDYPQIIFIDSDLIVLENLDRFFAYPQL 269
           WKIK I+RIR+P A++ AYNEWNYSKLR+WQLT+Y +IIFID+D IVL N+D  F YPQL
Sbjct: 315 WKIKHIERIRSPNAKKNAYNEWNYSKLRLWQLTEYDKIIFIDADFIVLNNMDSLFVYPQL 374

Query: 268 SAAGNDKWLFNSGVMLIEPSDCVFKMLMKKMYTLSSYNGGDQGFLNEAFTWWHRLPTRLN 89
           SA GN++ LFNSG+M++EPS+C+F+ LM+K  T+ SYNGGDQGFLNE FTWWHR P RLN
Sbjct: 375 SAVGNNRVLFNSGIMVVEPSECMFQTLMEKSQTMVSYNGGDQGFLNEVFTWWHRWPRRLN 434

Query: 88  FLKIFEGVKDEEHNVPDSVYTIHYLGLKP 2
           FLKIF+  +  EH  P +VY IHYLGLKP
Sbjct: 435 FLKIFK--EKNEHETPANVYAIHYLGLKP 461


>ref|XP_002319544.1| predicted protein [Populus trichocarpa] gi|222857920|gb|EEE95467.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  224 bits (570), Expect = 7e-57
 Identities = 101/149 (67%), Positives = 125/149 (83%)
 Frame = -3

Query: 448 WKIKDIKRIRNPQAQRGAYNEWNYSKLRIWQLTDYPQIIFIDSDLIVLENLDRFFAYPQL 269
           WK K I+ IR+P A++ +YNEWNYSKLR+WQLTDY +++FID+DLIVL+N+D+FFAYPQL
Sbjct: 193 WKTKLIQPIRSPFARKDSYNEWNYSKLRLWQLTDYDKVVFIDADLIVLKNIDKFFAYPQL 252

Query: 268 SAAGNDKWLFNSGVMLIEPSDCVFKMLMKKMYTLSSYNGGDQGFLNEAFTWWHRLPTRLN 89
           SAA NDK LFNSG+M+IEPS C+F+ +M K   L SYNGGDQGFLNEAFTWWHRLPTRLN
Sbjct: 253 SAAPNDKVLFNSGIMVIEPSTCLFEDMMSKRNKLLSYNGGDQGFLNEAFTWWHRLPTRLN 312

Query: 88  FLKIFEGVKDEEHNVPDSVYTIHYLGLKP 2
           +LKIF+   + +H +    YTIH+LGLKP
Sbjct: 313 YLKIFKNQGNPDHEMQKGPYTIHFLGLKP 341


>ref|XP_002328440.1| predicted protein [Populus trichocarpa] gi|222838155|gb|EEE76520.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  217 bits (553), Expect = 7e-55
 Identities = 97/149 (65%), Positives = 121/149 (81%)
 Frame = -3

Query: 448 WKIKDIKRIRNPQAQRGAYNEWNYSKLRIWQLTDYPQIIFIDSDLIVLENLDRFFAYPQL 269
           WK K I+ IR+P A++ +YNEWNYSKLR+WQLTDY ++IFID+DLI+L+N+D+FFAYPQL
Sbjct: 198 WKTKQIQPIRSPFARKNSYNEWNYSKLRLWQLTDYDKVIFIDADLIILKNIDKFFAYPQL 257

Query: 268 SAAGNDKWLFNSGVMLIEPSDCVFKMLMKKMYTLSSYNGGDQGFLNEAFTWWHRLPTRLN 89
           SAA NDK LFNSG+M+IEPS C+F+ +M K   L SYNGGDQGFLNE FTWWHRLP +LN
Sbjct: 258 SAAPNDKVLFNSGIMVIEPSTCLFEDMMSKSRRLMSYNGGDQGFLNEVFTWWHRLPGKLN 317

Query: 88  FLKIFEGVKDEEHNVPDSVYTIHYLGLKP 2
           +LKI +   +  H +    YTIH+LGLKP
Sbjct: 318 YLKICKRQDNPNHEMEKGTYTIHFLGLKP 346


>ref|XP_003591107.1| Glycogenin-1 [Medicago truncatula] gi|355480155|gb|AES61358.1|
           Glycogenin-1 [Medicago truncatula]
          Length = 559

 Score =  215 bits (548), Expect = 3e-54
 Identities = 100/149 (67%), Positives = 121/149 (81%)
 Frame = -3

Query: 448 WKIKDIKRIRNPQAQRGAYNEWNYSKLRIWQLTDYPQIIFIDSDLIVLENLDRFFAYPQL 269
           WKIK I+RI NP A++G YNEWNYSKLRIWQLT Y +IIF+DSDL+VL+N+D FFAYPQL
Sbjct: 323 WKIKHIQRILNPFAKKGTYNEWNYSKLRIWQLTMYDKIIFLDSDLLVLKNIDHFFAYPQL 382

Query: 268 SAAGNDKWLFNSGVMLIEPSDCVFKMLMKKMYTLSSYNGGDQGFLNEAFTWWHRLPTRLN 89
           SAA ND  LFNSG+M+IEPS C+F+ LM K   +  YNGGDQGFLNE FTWWHRLPT++N
Sbjct: 383 SAAPNDLTLFNSGLMVIEPSMCMFEELMNKTLKVKPYNGGDQGFLNEVFTWWHRLPTKVN 442

Query: 88  FLKIFEGVKDEEHNVPDSVYTIHYLGLKP 2
           +LK FEG  + E  + + +Y +HYLGLKP
Sbjct: 443 YLKSFEGNNNNE-IIHEDLYVMHYLGLKP 470


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