BLASTX nr result
ID: Coptis24_contig00037332
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037332 (358 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68532.1| hypothetical protein VITISV_032270 [Vitis vinifera] 123 2e-26 emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera] 119 2e-25 emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera] 118 4e-25 gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 107 1e-21 emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera] 96 2e-18 >emb|CAN68532.1| hypothetical protein VITISV_032270 [Vitis vinifera] Length = 572 Score = 123 bits (308), Expect = 2e-26 Identities = 63/118 (53%), Positives = 85/118 (72%) Frame = -3 Query: 356 DKFVLMKNEGFVGKSYCNNSGLFMLNVLDNIIINKNESASTYLLDSFNIWHGRLGHVNVQ 177 DK VL +N+ FVGK YCN GLFMLNV D II N +STY++DS+NIW+GRLGHVN Sbjct: 191 DKIVLTENDAFVGKGYCNK-GLFMLNVYD-IINNNAYFSSTYIVDSYNIWYGRLGHVNFS 248 Query: 176 YMKRMKACGLLSDISDFSNDKCEICAETKATKKPYRTVSRDKTGLLTLIHTDLGEFRS 3 YMK+M L+ +S +++KCE C E K TKK ++V R+ + LL+LIH+DLG+ ++ Sbjct: 249 YMKKMVELSLIPKLSLENHEKCESCVEFKTTKKSCKSVDRE-SNLLSLIHSDLGDLKN 305 >emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera] Length = 565 Score = 119 bits (299), Expect = 2e-25 Identities = 62/118 (52%), Positives = 81/118 (68%) Frame = -3 Query: 356 DKFVLMKNEGFVGKSYCNNSGLFMLNVLDNIIINKNESASTYLLDSFNIWHGRLGHVNVQ 177 DK VL KN+ FVGK YCN GLF LNV IIIN S+S Y++DS + WHGRLGHVN Sbjct: 281 DKIVLTKNDAFVGKGYCNQ-GLFRLNVF-YIIINNTSSSSAYIVDSCDTWHGRLGHVNFS 338 Query: 176 YMKRMKACGLLSDISDFSNDKCEICAETKATKKPYRTVSRDKTGLLTLIHTDLGEFRS 3 YMK+M L+ +S ++ KCE C E+K TKK ++V R+ LL+LIH+DLG+ ++ Sbjct: 339 YMKKMVELSLIPKLSLENHGKCESCVESKTTKKSCKSVERE-LDLLSLIHSDLGDLKN 395 >emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera] Length = 1096 Score = 118 bits (296), Expect = 4e-25 Identities = 61/118 (51%), Positives = 82/118 (69%) Frame = -3 Query: 356 DKFVLMKNEGFVGKSYCNNSGLFMLNVLDNIIINKNESASTYLLDSFNIWHGRLGHVNVQ 177 DK VL KN+ FVG YCN GLFMLNV D II N S+ Y++DS +IWHGRLGHVN Sbjct: 344 DKLVLTKNDAFVGNGYCNQ-GLFMLNVYD-IINNNTFSSFAYIVDSCDIWHGRLGHVNFS 401 Query: 176 YMKRMKACGLLSDISDFSNDKCEICAETKATKKPYRTVSRDKTGLLTLIHTDLGEFRS 3 YMK+M L+ +S ++ KCE C E+K TKK ++V ++ + LL+LIH+DLG+ ++ Sbjct: 402 YMKKMVELSLIPKLSLENHGKCESCVESKTTKKSCKSVEKE-SNLLSLIHSDLGDLKN 458 >gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo] Length = 1038 Score = 107 bits (266), Expect = 1e-21 Identities = 54/118 (45%), Positives = 76/118 (64%) Frame = -3 Query: 356 DKFVLMKNEGFVGKSYCNNSGLFMLNVLDNIIINKNESASTYLLDSFNIWHGRLGHVNVQ 177 DK VL KN FVGK Y +N GLF+LN + +N N S+S YL++S N+WHGRLGHVN Sbjct: 423 DKVVLTKNGNFVGKGYLSN-GLFVLNTIS---MNANASSSAYLIESANLWHGRLGHVNFA 478 Query: 176 YMKRMKACGLLSDISDFSNDKCEICAETKATKKPYRTVSRDKTGLLTLIHTDLGEFRS 3 ++++K L++ KC +C E+K KKP++ V T LL LI++DL +FR+ Sbjct: 479 SIRKLKDMRLINTSETHETGKCPVCIESKFHKKPFKPVEYRTTELLELIYSDLADFRT 536 >emb|CAN81655.1| hypothetical protein VITISV_042593 [Vitis vinifera] Length = 627 Score = 96.3 bits (238), Expect = 2e-18 Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Frame = -3 Query: 356 DKFVLMKNEGFVGKSYCNNSGLFMLNVLDNIIINKNESAST--YLLDSFNIWHGRLGHVN 183 DKFVLMKN +VGK Y N GLF +NV+ + N AST YL++SF +WH RLGHV+ Sbjct: 229 DKFVLMKNGMYVGKGYMTN-GLFKMNVMTVKLDFNNNKASTFVYLIESFTLWHDRLGHVS 287 Query: 182 VQYMKRMKACGLLSDISDFSNDKCEICAETKATKKPYRTVSRDKTGLLTLIHTDL 18 + +KR+ LL S KCE+C E K K P+ ++ R+ T L LIH+D+ Sbjct: 288 NKTLKRLINMNLLPSFSIDFKHKCEVCVEAKMAKPPFHSIERN-TESLDLIHSDI 341