BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037330
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306231.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
emb|CBI28351.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14

>ref|XP_002306231.1| predicted protein [Populus trichocarpa] gi|222849195|gb|EEE86742.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/54 (68%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = +1

Query: 1   PESPVRIVKNLRICGDCH--MELVSELERRDITVRDCIRFHHFKAGLCSCGGYW 156
           P +P++IVKNLR+CGDCH  ++L+S LE RDI VRD  RFHHFK GLCSCG YW
Sbjct: 427 PGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480


>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/54 (64%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = +1

Query: 1   PESPVRIVKNLRICGDCH--MELVSELERRDITVRDCIRFHHFKAGLCSCGGYW 156
           P +P++IVKNLR+CGDCH  ++L+S++E RDI VRD  RFHHFK G CSCG YW
Sbjct: 717 PGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770


>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/54 (64%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = +1

Query: 1   PESPVRIVKNLRICGDCH--MELVSELERRDITVRDCIRFHHFKAGLCSCGGYW 156
           P +P++IVKNLR+CGDCH  ++L+S++E RDI VRD  RFHHFK G CSCG YW
Sbjct: 813 PGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866


>ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/54 (68%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = +1

Query: 1   PESPVRIVKNLRICGDCH--MELVSELERRDITVRDCIRFHHFKAGLCSCGGYW 156
           PE P++IVKNLR+CGDCH  ++LVS +E+R I VRD  RFHHFK GLCSCG YW
Sbjct: 823 PEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876


>ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 34/54 (62%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = +1

Query: 1   PESPVRIVKNLRICGDCHM--ELVSELERRDITVRDCIRFHHFKAGLCSCGGYW 156
           P +P++IVKNLR+CGDCHM  ++VS +E R+I +RDC RFHHF AG CSCG +W
Sbjct: 821 PRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874