BLASTX nr result

ID: Coptis24_contig00037316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037316
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326185.1| EIN2 -like protein, nramp transporter [Popul...    60   2e-07
ref|XP_002322882.1| EIN2 -like protein, nramp transporter [Popul...    56   3e-06
ref|XP_002519522.1| ethylene insensitive protein, putative [Rici...    55   6e-06

>ref|XP_002326185.1| EIN2 -like protein, nramp transporter [Populus trichocarpa]
           gi|222833378|gb|EEE71855.1| EIN2 -like protein, nramp
           transporter [Populus trichocarpa]
          Length = 1310

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = -1

Query: 123 FFAVLCFFSGIFLVKYVVMSSAASIFYSAGLVVLSF*DIL 4
           FFA+LC FSGI+LV YV+M+SAA++FYS GLV+L+F D +
Sbjct: 238 FFAILCIFSGIYLVNYVLMNSAANVFYSTGLVLLTFPDAM 277


>ref|XP_002322882.1| EIN2 -like protein, nramp transporter [Populus trichocarpa]
           gi|222867512|gb|EEF04643.1| EIN2 -like protein, nramp
           transporter [Populus trichocarpa]
          Length = 1259

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 35/40 (87%)
 Frame = -1

Query: 123 FFAVLCFFSGIFLVKYVVMSSAASIFYSAGLVVLSF*DIL 4
           FFA+LC FSGI+LV +V+M+SAA++F+S GLV+L+F D +
Sbjct: 238 FFAILCIFSGIYLVNFVLMNSAANVFHSTGLVLLTFPDAM 277


>ref|XP_002519522.1| ethylene insensitive protein, putative [Ricinus communis]
           gi|223541385|gb|EEF42936.1| ethylene insensitive
           protein, putative [Ricinus communis]
          Length = 1290

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = -1

Query: 156 VVYASPCLLCKFFAVLCFFSGIFLVKYVVMSSAASIFYSAGLVVLSF*DIL 4
           +V      L  FFA+LC FSGI+L+ YV+M+SAA++F S GLV+L+F D +
Sbjct: 227 IVSKDTLCLHHFFAILCVFSGIYLLNYVLMNSAANVFNSTGLVLLTFPDAM 277


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