BLASTX nr result
ID: Coptis24_contig00037265
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037265 (404 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001762646.1| predicted protein [Physcomitrella patens sub... 60 3e-09 ref|XP_002963888.1| hypothetical protein SELMODRAFT_80516 [Selag... 60 3e-09 ref|XP_002988291.1| hypothetical protein SELMODRAFT_447254 [Sela... 60 3e-09 ref|XP_003594547.1| SNW domain-containing protein [Medicago trun... 60 4e-09 dbj|BAD44230.1| unknown protein [Arabidopsis thaliana] 60 7e-09 >ref|XP_001762646.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686054|gb|EDQ72445.1| predicted protein [Physcomitrella patens subsp. patens] Length = 604 Score = 60.5 bits (145), Expect(2) = 3e-09 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -3 Query: 84 VPVMHSPSRPVAVKDQQGWKVPPCISNW 1 VPVMHSP RPV VKDQQ WK+PPCISNW Sbjct: 230 VPVMHSPPRPVTVKDQQDWKIPPCISNW 257 Score = 25.4 bits (54), Expect(2) = 3e-09 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -1 Query: 155 YIKYTPSHHNSAYN 114 +IKYTPS ++AYN Sbjct: 180 FIKYTPSQQSAAYN 193 >ref|XP_002963888.1| hypothetical protein SELMODRAFT_80516 [Selaginella moellendorffii] gi|300169156|gb|EFJ35759.1| hypothetical protein SELMODRAFT_80516 [Selaginella moellendorffii] Length = 589 Score = 60.5 bits (145), Expect(2) = 3e-09 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -3 Query: 84 VPVMHSPSRPVAVKDQQGWKVPPCISNW 1 VPVMHSP RPV VKDQQ WK+PPCISNW Sbjct: 230 VPVMHSPPRPVTVKDQQDWKIPPCISNW 257 Score = 25.4 bits (54), Expect(2) = 3e-09 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -1 Query: 155 YIKYTPSHHNSAYN 114 YIKYTPS +SA+N Sbjct: 180 YIKYTPSQLSSAFN 193 >ref|XP_002988291.1| hypothetical protein SELMODRAFT_447254 [Selaginella moellendorffii] gi|300144023|gb|EFJ10710.1| hypothetical protein SELMODRAFT_447254 [Selaginella moellendorffii] Length = 586 Score = 60.5 bits (145), Expect(2) = 3e-09 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -3 Query: 84 VPVMHSPSRPVAVKDQQGWKVPPCISNW 1 VPVMHSP RPV VKDQQ WK+PPCISNW Sbjct: 230 VPVMHSPPRPVTVKDQQDWKIPPCISNW 257 Score = 25.4 bits (54), Expect(2) = 3e-09 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -1 Query: 155 YIKYTPSHHNSAYN 114 YIKYTPS +SA+N Sbjct: 180 YIKYTPSQLSSAFN 193 >ref|XP_003594547.1| SNW domain-containing protein [Medicago truncatula] gi|355483595|gb|AES64798.1| SNW domain-containing protein [Medicago truncatula] Length = 613 Score = 60.5 bits (145), Expect(2) = 4e-09 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -3 Query: 84 VPVMHSPSRPVAVKDQQGWKVPPCISNW 1 VPVMHSP RPV VKDQQ WK+PPCISNW Sbjct: 239 VPVMHSPPRPVTVKDQQDWKIPPCISNW 266 Score = 25.0 bits (53), Expect(2) = 4e-09 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -1 Query: 155 YIKYTPSHHNSAYN 114 YIKY PS N+A+N Sbjct: 189 YIKYKPSQQNAAFN 202 >dbj|BAD44230.1| unknown protein [Arabidopsis thaliana] Length = 613 Score = 60.5 bits (145), Expect(2) = 7e-09 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -3 Query: 84 VPVMHSPSRPVAVKDQQGWKVPPCISNW 1 VPVMHSP RPV VKDQQ WK+PPCISNW Sbjct: 238 VPVMHSPPRPVTVKDQQDWKIPPCISNW 265 Score = 24.3 bits (51), Expect(2) = 7e-09 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -1 Query: 155 YIKYTPSHHNSAYN 114 YIKY PS +SA+N Sbjct: 188 YIKYKPSQQSSAFN 201