BLASTX nr result

ID: Coptis24_contig00037255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037255
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23512.3| unnamed protein product [Vitis vinifera]               92   6e-17
emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]    92   6e-17
ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephal...    84   9e-15
ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate...    74   1e-11

>emb|CBI23512.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
 Frame = +1

Query: 40  AICQRYSIKIVNFASLMDGKAMWCLIDYYFRHELPCSSFC-----KAVKIQIFGLLIDCS 204
           A+C+ Y  KI NFASL+DGKAMWCL+DYYFR EL CS        +  K  I     DC+
Sbjct: 560 AVCESYDFKIENFASLVDGKAMWCLLDYYFRKELHCSRSYNDPNERNGKKSIIS-ATDCT 618

Query: 205 DAVHNLILSQKLITMLGSFPKI 270
           DA HN ILSQKL T+LG+FP++
Sbjct: 619 DAAHNFILSQKLTTLLGNFPEV 640


>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/81 (56%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
 Frame = +1

Query: 40  AICQRYSIKIVNFASLMDGKAMWCLIDYYFRHELPCS-SFCKAVKIQIFGLLI---DCSD 207
           A+C+ Y  KI NFASL+DGKAMWCL+DYYFR EL CS S+    +      +I   DC+D
Sbjct: 561 AVCESYDFKIENFASLVDGKAMWCLLDYYFRKELHCSRSYNDPNERNGXKSIISATDCTD 620

Query: 208 AVHNLILSQKLITMLGSFPKI 270
           A HN ILSQKL T+LG+FP++
Sbjct: 621 AAHNFILSQKLTTLLGNFPEV 641


>ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
           homolog [Cucumis sativus]
          Length = 1368

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +1

Query: 43  ICQRYSIKIVNFASLMDGKAMWCLIDYYFRHELPC--SSFCKAVKIQIFGLLIDCSDAVH 216
           +C  Y IKI +F+SL+DGKA+WCL+DYYFR +L C  SS  K    +    +  CSDA H
Sbjct: 561 VCDNYDIKISSFSSLVDGKAIWCLLDYYFRKDLHCSISSKVKTNGEESIMSVTHCSDAAH 620

Query: 217 NLILSQKLITMLGSFPKI 270
           N IL QKL ++LG FP+I
Sbjct: 621 NFILLQKLASLLGDFPEI 638


>ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein
           [Medicago truncatula] gi|355511469|gb|AES92611.1|
           Abnormal spindle-like microcephaly-associated
           protein-like protein [Medicago truncatula]
          Length = 1503

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/82 (47%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = +1

Query: 40  AICQRYSIKIVNFASLMDGKAMWCLIDYYFRHEL--PCS---SFCKAVKIQIFGLLIDCS 204
           A+C  Y+  + NF SL+DGKA+WCL+D+YF+ EL   CS    + K+ K  I   + + S
Sbjct: 567 AVCDHYNCPVDNFHSLVDGKAIWCLLDHYFQKELHNVCSLKEFYEKSGKTSIMS-VNEYS 625

Query: 205 DAVHNLILSQKLITMLGSFPKI 270
           DA++N ILSQKL T+LG+FP++
Sbjct: 626 DALYNFILSQKLTTLLGNFPEV 647


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