BLASTX nr result

ID: Coptis24_contig00037231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037231
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39492.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis...   152   2e-35
ref|XP_002520655.1| nucleic acid binding protein, putative [Rici...   151   6e-35
ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis...   149   2e-34
emb|CBI32240.3| unnamed protein product [Vitis vinifera]              149   2e-34

>emb|CBI39492.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  152 bits (385), Expect = 2e-35
 Identities = 68/83 (81%), Positives = 72/83 (86%)
 Frame = -1

Query: 251 PWKLRQRSSTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 72
           PWKLRQRSST+IRKRVY+CPEP+CVHHNP+RALGDLTGIKKHF RKHGE          K
Sbjct: 112 PWKLRQRSSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKK 171

Query: 71  YAVQSDWKAHSKTCGTREYKCDC 3
           YAVQSDWKAHSKTCGTREYKCDC
Sbjct: 172 YAVQSDWKAHSKTCGTREYKCDC 194


>ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
          Length = 531

 Score =  152 bits (385), Expect = 2e-35
 Identities = 68/83 (81%), Positives = 72/83 (86%)
 Frame = -1

Query: 251 PWKLRQRSSTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 72
           PWKLRQRSST+IRKRVY+CPEP+CVHHNP+RALGDLTGIKKHF RKHGE          K
Sbjct: 112 PWKLRQRSSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKK 171

Query: 71  YAVQSDWKAHSKTCGTREYKCDC 3
           YAVQSDWKAHSKTCGTREYKCDC
Sbjct: 172 YAVQSDWKAHSKTCGTREYKCDC 194


>ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540040|gb|EEF41617.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 631

 Score =  151 bits (381), Expect = 6e-35
 Identities = 66/83 (79%), Positives = 72/83 (86%)
 Frame = -1

Query: 251 PWKLRQRSSTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 72
           PWKLRQR++T+++KRVYICPEPTCVHHNP+RALGDLTGIKKHFSRKHGE          K
Sbjct: 139 PWKLRQRTTTEVKKRVYICPEPTCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKK 198

Query: 71  YAVQSDWKAHSKTCGTREYKCDC 3
           YAVQSDWKAH KTCGTREYKCDC
Sbjct: 199 YAVQSDWKAHQKTCGTREYKCDC 221


>ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
          Length = 570

 Score =  149 bits (377), Expect = 2e-34
 Identities = 66/83 (79%), Positives = 72/83 (86%)
 Frame = -1

Query: 251 PWKLRQRSSTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 72
           PWKLRQR++ +IRKRVYICPEP+CVHHNP+RALGDLTGIKKH+SRKHGE          K
Sbjct: 121 PWKLRQRTTNEIRKRVYICPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKK 180

Query: 71  YAVQSDWKAHSKTCGTREYKCDC 3
           YAVQSDWKAHSKTCGTREYKCDC
Sbjct: 181 YAVQSDWKAHSKTCGTREYKCDC 203


>emb|CBI32240.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  149 bits (377), Expect = 2e-34
 Identities = 66/83 (79%), Positives = 72/83 (86%)
 Frame = -1

Query: 251 PWKLRQRSSTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 72
           PWKLRQR++ +IRKRVYICPEP+CVHHNP+RALGDLTGIKKH+SRKHGE          K
Sbjct: 31  PWKLRQRTTNEIRKRVYICPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKK 90

Query: 71  YAVQSDWKAHSKTCGTREYKCDC 3
           YAVQSDWKAHSKTCGTREYKCDC
Sbjct: 91  YAVQSDWKAHSKTCGTREYKCDC 113


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