BLASTX nr result

ID: Coptis24_contig00037226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037226
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein...   105   3e-21
emb|CBI31167.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_003623642.1| BTB/POZ domain-containing protein [Medicago ...   100   2e-19
ref|XP_002882578.1| hypothetical protein ARALYDRAFT_478168 [Arab...    96   4e-18

>ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein At3g08570-like isoform
           1 [Vitis vinifera]
          Length = 636

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/64 (78%), Positives = 54/64 (84%)
 Frame = -1

Query: 211 QAHPMLTENECKKLCKFIDCQKLSQEACNHVAQNDRLPVQHCVRVLYLEQVRLKRLFFCS 32
           +AHPMLTE+ECKKLCKFIDC+KLSQEACNH AQNDRLPVQ  VRVLY EQ+RLK     S
Sbjct: 463 KAHPMLTEHECKKLCKFIDCKKLSQEACNHAAQNDRLPVQMTVRVLYFEQLRLKSSLSGS 522

Query: 31  CGDG 20
            GDG
Sbjct: 523 SGDG 526


>emb|CBI31167.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/61 (80%), Positives = 53/61 (86%)
 Frame = -1

Query: 211 QAHPMLTENECKKLCKFIDCQKLSQEACNHVAQNDRLPVQHCVRVLYLEQVRLKRLFFCS 32
           +AHPMLTE+ECKKLCKFIDC+KLSQEACNH AQNDRLPVQ  VRVLY EQ+RLK    CS
Sbjct: 429 KAHPMLTEHECKKLCKFIDCKKLSQEACNHAAQNDRLPVQMTVRVLYFEQLRLKS-SLCS 487

Query: 31  C 29
           C
Sbjct: 488 C 488


>ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|222868314|gb|EEF05445.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = -1

Query: 211 QAHPMLTENECKKLCKFIDCQKLSQEACNHVAQNDRLPVQHCVRVLYLEQVRLKRLFFCS 32
           +AHP+L+E+ECKKLCK IDCQKLSQEACNH AQNDRLPVQ  V+VLY EQ+RLK     S
Sbjct: 407 KAHPLLSEHECKKLCKLIDCQKLSQEACNHAAQNDRLPVQMTVQVLYSEQLRLKNALSGS 466

Query: 31  CGDG 20
            GDG
Sbjct: 467 SGDG 470


>ref|XP_003623642.1| BTB/POZ domain-containing protein [Medicago truncatula]
           gi|355498657|gb|AES79860.1| BTB/POZ domain-containing
           protein [Medicago truncatula]
          Length = 704

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/66 (71%), Positives = 53/66 (80%)
 Frame = -1

Query: 211 QAHPMLTENECKKLCKFIDCQKLSQEACNHVAQNDRLPVQHCVRVLYLEQVRLKRLFFCS 32
           +AH  LTE ECKKLCKFIDCQKLSQEACNH AQNDRLP+Q  V+VLY EQ+RLK     S
Sbjct: 501 KAHTALTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPLQMVVQVLYFEQLRLKNAVSGS 560

Query: 31  CGDGVV 14
            GDG++
Sbjct: 561 SGDGLL 566


>ref|XP_002882578.1| hypothetical protein ARALYDRAFT_478168 [Arabidopsis lyrata subsp.
           lyrata] gi|297328418|gb|EFH58837.1| hypothetical protein
           ARALYDRAFT_478168 [Arabidopsis lyrata subsp. lyrata]
          Length = 606

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = -1

Query: 211 QAHPMLTENECKKLCKFIDCQKLSQEACNHVAQNDRLPVQHCVRVLYLEQVRLKR 47
           +AHP+LTE ECKKLCKFIDC+KLSQEA NHVAQNDRLPV   VRVLY EQ+RLK+
Sbjct: 414 KAHPLLTEEECKKLCKFIDCKKLSQEASNHVAQNDRLPVHMVVRVLYTEQLRLKK 468


Top