BLASTX nr result
ID: Coptis24_contig00037197
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037197 (356 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containi... 172 2e-41 ref|XP_002308572.1| predicted protein [Populus trichocarpa] gi|2... 170 1e-40 ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containi... 157 8e-37 ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [S... 155 2e-36 tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, parti... 155 3e-36 >ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis sativus] gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis sativus] Length = 638 Score = 172 bits (437), Expect = 2e-41 Identities = 85/118 (72%), Positives = 101/118 (85%) Frame = +2 Query: 2 NGHYVLLANIYAKARKWEDVIKVRRLMIDRCSNKIAGWSLIESHGKVHRFIAGDRQHESS 181 NGHYV LA I+A+ RKWEDV KVRRLM +R SNKIAGWSLIE+ G+VHRF+AGD++HE + Sbjct: 469 NGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERT 528 Query: 182 TEIYKMLEEIQRRLAEAGYSADISLVLHDIGEEEKEIAIRVHSERLAVAFGLLVTEVG 355 TEIYKMLE + R+A AGYSA++S VLHDI EEEKE AI+ HSERLA+AFGLLVT+ G Sbjct: 529 TEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKDG 586 >ref|XP_002308572.1| predicted protein [Populus trichocarpa] gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa] Length = 433 Score = 170 bits (430), Expect = 1e-40 Identities = 83/118 (70%), Positives = 100/118 (84%) Frame = +2 Query: 2 NGHYVLLANIYAKARKWEDVIKVRRLMIDRCSNKIAGWSLIESHGKVHRFIAGDRQHESS 181 +GHYV LA+IYA +RKWEDV++VRRLM +R ++K+AGWSLIE+ GKVHRF+AG R+HE S Sbjct: 264 DGHYVQLASIYANSRKWEDVVRVRRLMAERNTSKVAGWSLIEARGKVHRFVAGHREHEQS 323 Query: 182 TEIYKMLEEIQRRLAEAGYSADISLVLHDIGEEEKEIAIRVHSERLAVAFGLLVTEVG 355 EI KMLE I+ RLA AGY ++S VLHDIGEEEKE AI+VHSERLA+AFGLLVT G Sbjct: 324 LEIQKMLEIIETRLAAAGYVPNVSPVLHDIGEEEKENAIKVHSERLAIAFGLLVTGPG 381 >ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Brachypodium distachyon] Length = 635 Score = 157 bits (397), Expect = 8e-37 Identities = 73/118 (61%), Positives = 96/118 (81%) Frame = +2 Query: 2 NGHYVLLANIYAKARKWEDVIKVRRLMIDRCSNKIAGWSLIESHGKVHRFIAGDRQHESS 181 +GHYVLLA+IYAKA+KW++V +VR+LM R + K AGWSL+E+ G +H+F+ GD H+ S Sbjct: 466 DGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEAQGNLHKFLVGDMDHKDS 525 Query: 182 TEIYKMLEEIQRRLAEAGYSADISLVLHDIGEEEKEIAIRVHSERLAVAFGLLVTEVG 355 +IY ML+ I RRLA+AGY D+S VLHDIG+EEK AI+VHSERLA+A+G +VTEVG Sbjct: 526 VQIYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVTEVG 583 >ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor] gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor] Length = 786 Score = 155 bits (393), Expect = 2e-36 Identities = 74/118 (62%), Positives = 96/118 (81%) Frame = +2 Query: 2 NGHYVLLANIYAKARKWEDVIKVRRLMIDRCSNKIAGWSLIESHGKVHRFIAGDRQHESS 181 +G+YVLLA+IYAKA+KW++V KVR+LM +R ++K AGWSL+E+HG VH+F+ GD H+ S Sbjct: 466 DGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAHGIVHKFLVGDMDHKDS 525 Query: 182 TEIYKMLEEIQRRLAEAGYSADISLVLHDIGEEEKEIAIRVHSERLAVAFGLLVTEVG 355 +IY ML I RRLAEAGY D+S VLHDIG+EEK AI+VHSERLA+A+G +V E G Sbjct: 526 VQIYNMLCMIDRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAG 583 >tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays] Length = 635 Score = 155 bits (392), Expect = 3e-36 Identities = 74/118 (62%), Positives = 95/118 (80%) Frame = +2 Query: 2 NGHYVLLANIYAKARKWEDVIKVRRLMIDRCSNKIAGWSLIESHGKVHRFIAGDRQHESS 181 +G+YVLLA+IYAKA+KW++V KVR+LM +R ++K AGWSL+E+HG VH+F+ GD H+ S Sbjct: 468 DGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAHGIVHKFLVGDMNHKDS 527 Query: 182 TEIYKMLEEIQRRLAEAGYSADISLVLHDIGEEEKEIAIRVHSERLAVAFGLLVTEVG 355 IY ML I RRLAEAGY D+S VLHDIG+EEK AI+VHSERLA+A+G +V E G Sbjct: 528 ARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAG 585