BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037187
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39619.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35

>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  166 bits (419), Expect = 2e-39
 Identities = 74/102 (72%), Positives = 92/102 (90%)
 Frame = +1

Query: 1   LGACKKHGNTQMAERVGKKLIEVQPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVV 180
           LGACKKHG+T+M ERVG+KLIE+QP +DGFHVLLSN++ASKG W++V+E+R +MK QGVV
Sbjct: 444 LGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVV 503

Query: 181 KTPGCSLIEINGVVHEFLAGDSTHPRLKEIENMLDEMAQRIK 306
           KTPGCSLIE NGVVHEFLAGD THP + ++E ML+EMA+R+K
Sbjct: 504 KTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLK 545


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  166 bits (419), Expect = 2e-39
 Identities = 74/102 (72%), Positives = 92/102 (90%)
 Frame = +1

Query: 1   LGACKKHGNTQMAERVGKKLIEVQPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVV 180
           LGACKKHG+T+M ERVG+KLIE+QP +DGFHVLLSN++ASKG W++V+E+R +MK QGVV
Sbjct: 612 LGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVV 671

Query: 181 KTPGCSLIEINGVVHEFLAGDSTHPRLKEIENMLDEMAQRIK 306
           KTPGCSLIE NGVVHEFLAGD THP + ++E ML+EMA+R+K
Sbjct: 672 KTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLK 713


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  152 bits (383), Expect = 4e-35
 Identities = 68/102 (66%), Positives = 86/102 (84%)
 Frame = +1

Query: 1   LGACKKHGNTQMAERVGKKLIEVQPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVV 180
           LGACKKHG+++M  RVG+KLIE+QP +DGFHVLLSN+YASKG+WD+V+EIR +M    V+
Sbjct: 684 LGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVL 743

Query: 181 KTPGCSLIEINGVVHEFLAGDSTHPRLKEIENMLDEMAQRIK 306
           K PGCS+IE NGV+HEFLAGD THP +  IE+ML EMA ++K
Sbjct: 744 KIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLK 785


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  152 bits (383), Expect = 4e-35
 Identities = 68/102 (66%), Positives = 86/102 (84%)
 Frame = +1

Query: 1   LGACKKHGNTQMAERVGKKLIEVQPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVV 180
           LGACKKHG+++M  RVG+KLIE+QP +DGFHVLLSN+YASKG+WD+V+EIR +M    V+
Sbjct: 549 LGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVL 608

Query: 181 KTPGCSLIEINGVVHEFLAGDSTHPRLKEIENMLDEMAQRIK 306
           K PGCS+IE NGV+HEFLAGD THP +  IE+ML EMA ++K
Sbjct: 609 KIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLK 650


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  151 bits (381), Expect = 6e-35
 Identities = 67/102 (65%), Positives = 85/102 (83%)
 Frame = +1

Query: 1   LGACKKHGNTQMAERVGKKLIEVQPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVV 180
           LGAC+KH + +M ER+G+KLI++QP +DGFHVLLSN+YASKG W  V+EIR IM   GVV
Sbjct: 579 LGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVV 638

Query: 181 KTPGCSLIEINGVVHEFLAGDSTHPRLKEIENMLDEMAQRIK 306
           KTPGCS+IE NG VHEFLAGD THP++ +IE+MLD +A ++K
Sbjct: 639 KTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLK 680