BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037163
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    64   2e-08
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    64   2e-08
ref|XP_002462720.1| hypothetical protein SORBIDRAFT_02g030860 [S...    61   1e-07
ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    61   1e-07
gb|EEC73092.1| hypothetical protein OsI_07068 [Oryza sativa Indi...    60   1e-07

>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
 Frame = +1

Query: 94   HGRSSYIWDTNWIPFHPYKKPFGPKPNHQNITFVSDLITDN-HWKIDLLNSLFLEVEVKA 270
            +GRS  +W   W+P    ++P  PK N+  I +V+DL+ DN  W  + +N +FL V+V+ 
Sbjct: 1297 NGRSVRVWQDPWLPRDLSRRPITPK-NNCRIKWVADLMLDNGMWDANKINQIFLPVDVEI 1355

Query: 271  ILQIKLSPNTPEK-LFWSCEKNGKFSVKSAY----NW 366
            IL+++ S    E  + W  +K G FSV++AY    NW
Sbjct: 1356 ILKLRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAENW 1392


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
 Frame = +1

Query: 94   HGRSSYIWDTNWIPFHPYKKPFGPKPNHQNITFVSDLITDN-HWKIDLLNSLFLEVEVKA 270
            +GRS  +W   W+P    ++P  PK N+  I +V+DL+ DN  W  + +N +FL V+V+ 
Sbjct: 1325 NGRSVRVWQDPWLPRDLSRRPITPK-NNCRIKWVADLMLDNGMWDANKINQIFLPVDVEI 1383

Query: 271  ILQIKLSPNTPEK-LFWSCEKNGKFSVKSAY----NW 366
            IL+++ S    E  + W  +K G FSV++AY    NW
Sbjct: 1384 ILKLRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAENW 1420


>ref|XP_002462720.1| hypothetical protein SORBIDRAFT_02g030860 [Sorghum bicolor]
           gi|241926097|gb|EER99241.1| hypothetical protein
           SORBIDRAFT_02g030860 [Sorghum bicolor]
          Length = 438

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
 Frame = +1

Query: 97  GRSSYIWDTNWIPFHPYKKPFGPKPNHQNITFVSDLIT-DNHWKIDLLNSLFLEVEVKAI 273
           G S+ IW   WI  H   +P  P+ N Q I  VSDL+T    W  +++ + FL ++  AI
Sbjct: 77  GVSTNIWSHKWISNHFAGQPITPRANLQ-ILNVSDLLTASGEWNTEIIKTCFLPIDADAI 135

Query: 274 LQIKLSPNTPEKLFWSCEKNGKFSVKSA----YNWFSSYNLNTTYYNVNKSIWTKL 429
           L+  +  N+ +   W+ EK G +SV+SA    YN    +N N    + +  +W  L
Sbjct: 136 LRQPIGRNSQDFWAWNSEKTGVYSVRSAYKLLYNKKFGWNQNLAPGSSSVGLWKML 191


>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
            gi|241919669|gb|EER92813.1| hypothetical protein
            SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
 Frame = +1

Query: 97   GRSSYIWDTNWIPFHPYKKPFGPKPNHQNITFVSDLITDN-HWKIDLLNSLFLEVEVKAI 273
            G S+ IW   WI  H   +P  P+ N Q I  VSDL+T +  W  +++ + FL ++  AI
Sbjct: 849  GVSTNIWSHKWISNHFAGQPITPRANLQ-ILNVSDLLTTSGEWNTEIIKTCFLPIDADAI 907

Query: 274  LQIKLSPNTPEKLFWSCEKNGKFSVKSA----YNWFSSYNLNTTYYNVNKSIWTKL 429
            L+  +  N+ +   W+ EK G +SV+SA    YN    +N N    + +  +W  L
Sbjct: 908  LRQPIGRNSQDFWAWNSEKTGVYSVRSAYKLLYNKKFGWNQNLAPGSSSVGLWKML 963


>gb|EEC73092.1| hypothetical protein OsI_07068 [Oryza sativa Indica Group]
          Length = 766

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +1

Query: 94  HGRSSYIWDTNWIPFHPYKKPFGPKPNHQNITFVSDLITDNHWKIDLLNSLFLEVEVKAI 273
           +GR   IW   W+P +  ++P   K N+  + +VSDL  D  W  + +N LFL ++ + I
Sbjct: 670 NGRCVRIWRDPWLPRNFSRRPISQK-NNCRLKWVSDLTADGVWNEEKINELFLSIDAEII 728

Query: 274 LQIKLSPNTPEK-LFWSCEKNGKFSVKSAY 360
            +I++S    E  L W  + +G+FSV+SAY
Sbjct: 729 SKIRISSREEEVFLAWHPDVHGRFSVRSAY 758