BLASTX nr result

ID: Coptis24_contig00037144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037144
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336804.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002323017.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002323018.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267...    95   5e-18
ref|XP_002308233.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>ref|XP_002336804.1| predicted protein [Populus trichocarpa] gi|222836934|gb|EEE75327.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = +1

Query: 1   NRLPALPPVGESSSSFERNLQLLVVIPVTAVMVAIAALLYQYRMRRK-KQSECLEAWELD 177
           +RL  + P+ E SSS  +  ++ ++  +  V   + A+L+ + + RK  QSE LE WELD
Sbjct: 139 SRLIPVAPISEESSSSFQPSEIAIIASLCGVTTILFAILFFHAVYRKWPQSEALEDWELD 198

Query: 178 CPHRFRYKDLYIATKGFKPSEIIGVGGFGTVYKG 279
           CPHRFRY+DL+ ATKGFK SEIIG GGFG VYKG
Sbjct: 199 CPHRFRYQDLHTATKGFKKSEIIGAGGFGAVYKG 232


>ref|XP_002323017.1| predicted protein [Populus trichocarpa] gi|222867647|gb|EEF04778.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/91 (53%), Positives = 59/91 (64%)
 Frame = +1

Query: 7   LPALPPVGESSSSFERNLQLLVVIPVTAVMVAIAALLYQYRMRRKKQSECLEAWELDCPH 186
           LP  P   ESSSSF+ ++  ++        +  A LL+    R   QSE LE WE+DCPH
Sbjct: 279 LPRAPISEESSSSFQPSVIAIIASLCGVTTILFAILLFHAVYRNWPQSEALEDWEVDCPH 338

Query: 187 RFRYKDLYIATKGFKPSEIIGVGGFGTVYKG 279
           RFRY+DL+ ATKGFK SEIIG GGFG VYKG
Sbjct: 339 RFRYQDLHTATKGFKKSEIIGAGGFGAVYKG 369


>ref|XP_002323018.1| predicted protein [Populus trichocarpa] gi|222867648|gb|EEF04779.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/91 (52%), Positives = 58/91 (63%)
 Frame = +1

Query: 7   LPALPPVGESSSSFERNLQLLVVIPVTAVMVAIAALLYQYRMRRKKQSECLEAWELDCPH 186
           LP  P   ESSSSF+ ++  ++        +  A L +    R   QSE LE WE+DCPH
Sbjct: 279 LPRAPISEESSSSFQPSVIAIIASLCGVTTILFAILFFHAVYRNWPQSEALEDWEVDCPH 338

Query: 187 RFRYKDLYIATKGFKPSEIIGVGGFGTVYKG 279
           RFRY+DL+ ATKGFK SEIIG GGFG VYKG
Sbjct: 339 RFRYQDLHTATKGFKKSEIIGAGGFGAVYKG 369


>ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]
          Length = 1435

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = +1

Query: 16   LPPVGESSSSFERNLQLLVVIPVTAVMVAIAALLYQYRMRRKKQSECLEAWELDCPHRFR 195
            +PP+   SSS    +++L+   +  +++   A L +   RRK + E LE WELD PHRFR
Sbjct: 1036 VPPIETDSSSLHTGIKVLIT-GLAVILLVFGAWLIRLLYRRKMKPEDLEDWELDYPHRFR 1094

Query: 196  YKDLYIATKGFKPSEIIGVGGFGTVYKG 279
            YKDLY +TKGFK SE+IGVGGF TVYKG
Sbjct: 1095 YKDLYTSTKGFKVSEVIGVGGFATVYKG 1122


>ref|XP_002308233.1| predicted protein [Populus trichocarpa] gi|222854209|gb|EEE91756.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/85 (55%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
 Frame = +1

Query: 31  ESSSSFERNLQLLV--VIPVTAVMVAIAALLYQYRMRRKKQSECLEAWELDCPHRFRYKD 204
           ++SSSF  ++ +++  +  VT ++  I   L  Y+++ + QSE LE WEL+CPHRFRY+D
Sbjct: 272 KNSSSFRPSVIVIIASLCGVTTLLFVILFFLTVYKIKWR-QSEALEDWELECPHRFRYQD 330

Query: 205 LYIATKGFKPSEIIGVGGFGTVYKG 279
           LY ATKGFK SEIIGVGGFG VYKG
Sbjct: 331 LYTATKGFKKSEIIGVGGFGAVYKG 355


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