BLASTX nr result

ID: Coptis24_contig00037142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037142
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310878.1| 1-aminocyclopropane-1-carboxylate [Populus t...   266   2e-69
gb|AAA03472.1| 1-aminocyclopropane-1-carboxylate (ACC) synthase,...   265   4e-69
gb|AAG28795.1| ACC synthase [Malus x domestica]                       265   4e-69
pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In C...   265   4e-69
dbj|BAA35057.1| 1-aminocyclopropane-1-carboxylate synthase [Malu...   265   4e-69

>ref|XP_002310878.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa]
           gi|222853781|gb|EEE91328.1|
           1-aminocyclopropane-1-carboxylate [Populus trichocarpa]
          Length = 467

 Score =  266 bits (679), Expect = 2e-69
 Identities = 132/164 (80%), Positives = 150/164 (91%)
 Frame = -3

Query: 493 GVEIVPIQCSSSNGFEITQSALEEAYQQAHELNLKVKGVLVTNPSNPLGTTLTREELDLL 314
           GVEIVPIQC+SSNGF+IT  ALEEA+Q+A + NL+VKGVLVTNPSNPLGTT+T  EL+LL
Sbjct: 157 GVEIVPIQCTSSNGFQITAPALEEAFQEAQKRNLRVKGVLVTNPSNPLGTTMTGNELNLL 216

Query: 313 ISFVDDKEIHLISDEIYSGTVFDSPGFVSVLEALKDRNLEDSDVWSRVHIVYSLSKDLGL 134
           +SFV +K IHLISDEIYSGTVF SPGFVS+LE LKDR  E+S VW+RVHIVYSLSKDLGL
Sbjct: 217 LSFVTEKGIHLISDEIYSGTVFSSPGFVSILEVLKDRKCENSQVWNRVHIVYSLSKDLGL 276

Query: 133 PGFRIGAIYSNDDVVVATATKMSSFGLVSSQTQYLLSAMLSDKE 2
           PGFR+GAIYSNDD+VV+ ATKMSSFGLVSSQTQYLLSA+LSDK+
Sbjct: 277 PGFRVGAIYSNDDMVVSAATKMSSFGLVSSQTQYLLSALLSDKK 320


>gb|AAA03472.1| 1-aminocyclopropane-1-carboxylate (ACC) synthase, partial [Malus
           sylvestris]
          Length = 464

 Score =  265 bits (676), Expect = 4e-69
 Identities = 132/165 (80%), Positives = 151/165 (91%), Gaps = 1/165 (0%)
 Frame = -3

Query: 493 GVEIVPIQCSSSNGFEITQSALEEAYQQAHELNLKVKGVLVTNPSNPLGTTLTREELDLL 314
           GVEIVPI C+SSNGF+IT++ALEEAYQ+A + NL+VKGVLVTNPSNPLGTT+TR EL LL
Sbjct: 148 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 207

Query: 313 ISFVDDKEIHLISDEIYSGTVFDSPGFVSVLEALKDRNL-EDSDVWSRVHIVYSLSKDLG 137
           +SFV+DK IHLISDEIYSGT F SP F+SV+E LKDRN  E+S+VW RVH+VYSLSKDLG
Sbjct: 208 LSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 267

Query: 136 LPGFRIGAIYSNDDVVVATATKMSSFGLVSSQTQYLLSAMLSDKE 2
           LPGFR+GAIYSNDD+VVA ATKMSSFGLVSSQTQ+LLSAMLSDK+
Sbjct: 268 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 312


>gb|AAG28795.1| ACC synthase [Malus x domestica]
          Length = 460

 Score =  265 bits (676), Expect = 4e-69
 Identities = 132/165 (80%), Positives = 151/165 (91%), Gaps = 1/165 (0%)
 Frame = -3

Query: 493 GVEIVPIQCSSSNGFEITQSALEEAYQQAHELNLKVKGVLVTNPSNPLGTTLTREELDLL 314
           GVEIVPI C+SSNGF+IT++ALEEAYQ+A + NL+VKGVLVTNPSNPLGTT+TR EL LL
Sbjct: 144 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 203

Query: 313 ISFVDDKEIHLISDEIYSGTVFDSPGFVSVLEALKDRNL-EDSDVWSRVHIVYSLSKDLG 137
           +SFV+DK IHLISDEIYSGT F SP F+SV+E LKDRN  E+S+VW RVH+VYSLSKDLG
Sbjct: 204 LSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 263

Query: 136 LPGFRIGAIYSNDDVVVATATKMSSFGLVSSQTQYLLSAMLSDKE 2
           LPGFR+GAIYSNDD+VVA ATKMSSFGLVSSQTQ+LLSAMLSDK+
Sbjct: 264 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 308


>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
           Aminoethoxyvinylglycine gi|30749447|pdb|1M4N|A Chain A,
           Crystal Structure Of Apple Acc Synthase In Complex With
           [2-(Amino-
           Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
          Length = 435

 Score =  265 bits (676), Expect = 4e-69
 Identities = 132/165 (80%), Positives = 151/165 (91%), Gaps = 1/165 (0%)
 Frame = -3

Query: 493 GVEIVPIQCSSSNGFEITQSALEEAYQQAHELNLKVKGVLVTNPSNPLGTTLTREELDLL 314
           GVEIVPI C+SSNGF+IT++ALEEAYQ+A + NL+VKGVLVTNPSNPLGTT+TR EL LL
Sbjct: 157 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 216

Query: 313 ISFVDDKEIHLISDEIYSGTVFDSPGFVSVLEALKDRNL-EDSDVWSRVHIVYSLSKDLG 137
           +SFV+DK IHLISDEIYSGT F SP F+SV+E LKDRN  E+S+VW RVH+VYSLSKDLG
Sbjct: 217 LSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 276

Query: 136 LPGFRIGAIYSNDDVVVATATKMSSFGLVSSQTQYLLSAMLSDKE 2
           LPGFR+GAIYSNDD+VVA ATKMSSFGLVSSQTQ+LLSAMLSDK+
Sbjct: 277 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 321


>dbj|BAA35057.1| 1-aminocyclopropane-1-carboxylate synthase [Malus x domestica]
          Length = 473

 Score =  265 bits (676), Expect = 4e-69
 Identities = 132/165 (80%), Positives = 151/165 (91%), Gaps = 1/165 (0%)
 Frame = -3

Query: 493 GVEIVPIQCSSSNGFEITQSALEEAYQQAHELNLKVKGVLVTNPSNPLGTTLTREELDLL 314
           GVEIVPI C+SSNGF+IT++ALEEAYQ+A + NL+VKGVLVTNPSNPLGTT+TR EL LL
Sbjct: 157 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 216

Query: 313 ISFVDDKEIHLISDEIYSGTVFDSPGFVSVLEALKDRNL-EDSDVWSRVHIVYSLSKDLG 137
           +SFV+DK IHLISDEIYSGT F SP F+SV+E LKDRN  E+S+VW RVH+VYSLSKDLG
Sbjct: 217 LSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 276

Query: 136 LPGFRIGAIYSNDDVVVATATKMSSFGLVSSQTQYLLSAMLSDKE 2
           LPGFR+GAIYSNDD+VVA ATKMSSFGLVSSQTQ+LLSAMLSDK+
Sbjct: 277 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 321


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