BLASTX nr result

ID: Coptis24_contig00037122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037122
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528328.1| PREDICTED: LOW QUALITY PROTEIN: 26.5 kDa hea...    87   2e-15
ref|XP_002517628.1| small heat-shock protein, putative [Ricinus ...    84   2e-14
ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mito...    78   7e-13
gb|ACU19816.1| unknown [Glycine max]                                   78   7e-13

>ref|XP_003528328.1| PREDICTED: LOW QUALITY PROTEIN: 26.5 kDa heat shock protein,
           mitochondrial-like [Glycine max]
          Length = 212

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = -2

Query: 272 EDIQITLVDGVLTIRGXXXXXXXXXXXXEQWAVYGYYN-NVLLPDDANEDGIQAEMKDGV 96
           ED++IT+ DGVLTI+G               + YGYYN ++LLPDDA  D I+AE+KDGV
Sbjct: 132 EDVKITIDDGVLTIKGEHKEEKDDDEHWSSTSSYGYYNTSLLLPDDAKADDIKAELKDGV 191

Query: 95  LKIIIPRTERPKKDVKEIKIQ 33
           L + IPRTE+PKKDVK++ ++
Sbjct: 192 LTVTIPRTEKPKKDVKQVTVE 212


>ref|XP_002517628.1| small heat-shock protein, putative [Ricinus communis]
           gi|223543260|gb|EEF44792.1| small heat-shock protein,
           putative [Ricinus communis]
          Length = 236

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
 Frame = -2

Query: 272 EDIQITLVDGVLTIRGXXXXXXXXXXXXEQ-WAV--YGYYN-NVLLPDDANEDGIQAEMK 105
           ED++IT+ DGVLTI+G            ++ W++  YGYYN +VLLPDDA  D I+AE+K
Sbjct: 153 EDLKITVDDGVLTIKGEHKEEEEEEGSDDEHWSMRSYGYYNTSVLLPDDAKADEIKAELK 212

Query: 104 DGVLKIIIPRTERPKKDVKEIKI 36
           +GVL I IPRTE+PKKDVKE++I
Sbjct: 213 NGVLHITIPRTEQPKKDVKEVQI 235


>ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|222847011|gb|EEE84558.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
 Frame = -2

Query: 272 EDIQITLVDGVLTIRGXXXXXXXXXXXXEQWAV--YGYYN-NVLLPDDANEDGIQAEMKD 102
           ED++I + DGVLTI+G            E W++  YG YN +++LPDDA  D I+AE+KD
Sbjct: 161 EDLKIAIDDGVLTIKGELKEEEEEGSDGEHWSMRSYGCYNTSIMLPDDAKTDEIKAELKD 220

Query: 101 GVLKIIIPRTERPKKDVKEIKI 36
           GVL I IPRTE+PKKDVKEI I
Sbjct: 221 GVLYITIPRTEKPKKDVKEIDI 242


>ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mitochondrial-like [Glycine
           max]
          Length = 225

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
 Frame = -2

Query: 272 EDIQITLVD-GVLTIRGXXXXXXXXXXXXEQWAVYGYYN-NVLLPDDANEDGIQAEMKDG 99
           ED++IT+ D GVLTI+G               + YGYYN +++LPDDA  D I+AE+KDG
Sbjct: 144 EDVKITIDDDGVLTIKGEHKEEKDDDEQYWSSSSYGYYNTSLILPDDAKADDIKAELKDG 203

Query: 98  VLKIIIPRTERPKKDVKEIKIQ 33
           VL +IIP+T+ P+KDVK++ I+
Sbjct: 204 VLTLIIPKTQNPQKDVKQVTIE 225


>gb|ACU19816.1| unknown [Glycine max]
          Length = 225

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
 Frame = -2

Query: 272 EDIQITLVD-GVLTIRGXXXXXXXXXXXXEQWAVYGYYN-NVLLPDDANEDGIQAEMKDG 99
           ED++IT+ D GVLTI+G               + YGYYN +++LPDDA  D I+AE+KDG
Sbjct: 144 EDVKITIDDDGVLTIKGEHKEEKDDDEQYWSSSSYGYYNTSLILPDDAKADDIKAELKDG 203

Query: 98  VLKIIIPRTERPKKDVKEIKIQ 33
           VL +IIP+T+ P+KDVK++ I+
Sbjct: 204 VLTLIIPKTQNPQKDVKQVTIE 225


Top