BLASTX nr result

ID: Coptis24_contig00037115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037115
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]    68   8e-21
emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]    68   8e-21
emb|CAN74934.1| hypothetical protein VITISV_036251 [Vitis vinifera]    76   3e-20
emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera]    67   4e-20
emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]    75   5e-20

>emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]
          Length = 1776

 Score = 68.2 bits (165), Expect(2) = 8e-21
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +3

Query: 3    DRFAMVVYKRCWHFMKISIMEVIRELQDNSYINWRFNTTFITLAPKVDGAATVGEFRPFS 182
            D F + VY+ CW  +K  +M V  E   N  IN   N TFI L PK   +  + ++RP S
Sbjct: 1079 DGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPIS 1138

Query: 183  LLGGVYKIVAKVLT 224
            L+  +YKI+AKVL+
Sbjct: 1139 LVTSLYKIIAKVLS 1152



 Score = 57.0 bits (136), Expect(2) = 8e-21
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +1

Query: 265  QGSSLEGRQVQDEVLVANELIDTRRRNGFQGMVCKIDFAKAFDSV 399
            QG+ +EGR + D VL+ANE++D +RR+G +G+V KIDF KA+D V
Sbjct: 1167 QGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHV 1211


>emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]
          Length = 971

 Score = 68.2 bits (165), Expect(2) = 8e-21
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +3

Query: 3   DRFAMVVYKRCWHFMKISIMEVIRELQDNSYINWRFNTTFITLAPKVDGAATVGEFRPFS 182
           D F + VY+ CW  +K  +M V  E   N  IN   N TFI L PK   +  + ++RP S
Sbjct: 114 DGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSVKISDYRPIS 173

Query: 183 LLGGVYKIVAKVLT 224
           L+  +YKI+AKVL+
Sbjct: 174 LVTSLYKIIAKVLS 187



 Score = 57.0 bits (136), Expect(2) = 8e-21
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +1

Query: 265 QGSSLEGRQVQDEVLVANELIDTRRRNGFQGMVCKIDFAKAFDSV 399
           QG+ +EGR + D VL+ANE++D +RR+G +G+V KIDF KA+D V
Sbjct: 202 QGAFVEGRHILDAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHV 246


>emb|CAN74934.1| hypothetical protein VITISV_036251 [Vitis vinifera]
          Length = 425

 Score = 76.3 bits (186), Expect(2) = 3e-20
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = +3

Query: 3   DRFAMVVYKRCWHFMKISIMEVIRELQDNSYINWRFNTTFITLAPKVDGAATVGEFRPFS 182
           D F +  ++RCW F K  IMEV +E  D+       N TF+ L PK  G   +G+FRP S
Sbjct: 154 DDFIVAFWQRCWDFAKEEIMEVFKEFHDHGSFPKSLNNTFLVLIPKKGGVEDLGDFRPIS 213

Query: 183 LLGGVYKIVAKVL 221
           LLGG+YK++AKVL
Sbjct: 214 LLGGLYKLLAKVL 226



 Score = 47.0 bits (110), Expect(2) = 3e-20
 Identities = 19/45 (42%), Positives = 33/45 (73%)
 Frame = +1

Query: 265 QGSSLEGRQVQDEVLVANELIDTRRRNGFQGMVCKIDFAKAFDSV 399
           Q + + GRQ+ D  L+ANE+ID+ ++   +G++CK+D  KA+DS+
Sbjct: 242 QNAFVMGRQILDASLIANEVIDSWQKRKEKGLICKLDIEKAYDSI 286


>emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera]
          Length = 1910

 Score = 67.4 bits (163), Expect(2) = 4e-20
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +3

Query: 3    DRFAMVVYKRCWHFMKISIMEVIRELQDNSYINWRFNTTFITLAPKVDGAATVGEFRPFS 182
            D F + VY+ CW  +K  +M V  E   N  IN   N TFI L PK   +  + ++RP S
Sbjct: 1173 DGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPKKSQSFKISDYRPIS 1232

Query: 183  LLGGVYKIVAKVLT 224
            L+  +YKI+AKVL+
Sbjct: 1233 LVTSLYKIIAKVLS 1246



 Score = 55.5 bits (132), Expect(2) = 4e-20
 Identities = 25/50 (50%), Positives = 36/50 (72%)
 Frame = +1

Query: 250  TSGAYQGSSLEGRQVQDEVLVANELIDTRRRNGFQGMVCKIDFAKAFDSV 399
            T    QG+ +EGR + D  L+ANE++D +RR+G +G+V KIDF KA+D V
Sbjct: 1256 TISGSQGAFVEGRHILDVALIANEVVDEKRRSGKEGIVFKIDFEKAYDHV 1305


>emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]
          Length = 1832

 Score = 74.7 bits (182), Expect(2) = 5e-20
 Identities = 34/73 (46%), Positives = 48/73 (65%)
 Frame = +3

Query: 3    DRFAMVVYKRCWHFMKISIMEVIRELQDNSYINWRFNTTFITLAPKVDGAATVGEFRPFS 182
            D F +  ++ CW F+K  I+E+ +E  D+S      N TF+ L PK  GA  +G+FRP S
Sbjct: 1321 DGFTLAFWQSCWEFIKEKIIEMFKEFYDHSSFLKSLNNTFLVLIPKKCGAEDLGDFRPIS 1380

Query: 183  LLGGVYKIVAKVL 221
            LLGG+YK++AKVL
Sbjct: 1381 LLGGLYKLLAKVL 1393



 Score = 47.8 bits (112), Expect(2) = 5e-20
 Identities = 19/45 (42%), Positives = 33/45 (73%)
 Frame = +1

Query: 265  QGSSLEGRQVQDEVLVANELIDTRRRNGFQGMVCKIDFAKAFDSV 399
            Q + + GRQ+ D  L+ANE+ID+ ++   +G++CK+D  KA+DS+
Sbjct: 1409 QNAFVRGRQILDASLIANEVIDSWQKRKEKGLICKLDIEKAYDSI 1453


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