BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037107
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]   125   5e-27
ref|XP_002512521.1| pentatricopeptide repeat-containing protein,...   120   9e-26
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23

>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/99 (59%), Positives = 78/99 (78%), Gaps = 1/99 (1%)
 Frame = -1

Query: 294 NNDVNQAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHI 115
           NN+  +AIL + EM+VA+S PNK+T+P++ KAC+DSG + EG+Q+H H++KHGL GDGHI
Sbjct: 116 NNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHI 175

Query: 114 RSAGIQMYATCGYTREARQIL-DLSEESDAVCWNAMIDG 1
            S+ I+MYA+ G   EAR+IL D   E DAVCWNAMIDG
Sbjct: 176 LSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDG 214



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -1

Query: 279 QAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHIRSAGI 100
           +A+  F +M      P KF  PS+  AC + GAL +G  IH +  ++ +Q DG + ++ +
Sbjct: 286 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 345

Query: 99  QMYATCGYTREARQILDLSEESDAVCWNAMIDG 1
            MYA CG    A ++ +     +   WNAMI G
Sbjct: 346 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 378


>ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548482|gb|EEF49973.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 422

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/98 (59%), Positives = 74/98 (75%)
 Frame = -1

Query: 294 NNDVNQAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHI 115
           N++  +AI F+ +M+ AN+ PNKFT+PSL KAC  + A  EG+Q+H HVIK GL GD HI
Sbjct: 107 NDEPFKAICFYYKMVAANARPNKFTYPSLLKACGVATAAKEGVQLHGHVIKQGLTGDVHI 166

Query: 114 RSAGIQMYATCGYTREARQILDLSEESDAVCWNAMIDG 1
           RSAGIQMYAT G+   AR++LD   ESD +C+NAMIDG
Sbjct: 167 RSAGIQMYATLGHMAAARRMLDEDGESDVICFNAMIDG 204



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/93 (34%), Positives = 47/93 (50%)
 Frame = -1

Query: 279 QAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHIRSAGI 100
           +A+  F  M      P KF   S+  AC + GAL +G  IH +V K+ +  D  + +A +
Sbjct: 275 EALEVFNVMQEEKIRPKKFVLSSVLAACANLGALDQGRWIHAYVKKNPMYLDAVLGTALV 334

Query: 99  QMYATCGYTREARQILDLSEESDAVCWNAMIDG 1
            MYA CG    A  + +  +E +   WNAMI G
Sbjct: 335 DMYAKCGRLDMAWDVFETMKEKEVFTWNAMICG 367


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/99 (57%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
 Frame = -1

Query: 294 NNDVNQAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHI 115
           NN+  +AIL + EM+VA+  PNK+T+P++ KAC+D+G + EG+Q+H H++KHGL GDGHI
Sbjct: 115 NNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHI 174

Query: 114 RSAGIQMYATCGYTREARQIL-DLSEESDAVCWNAMIDG 1
            S+ I+MYA+ G   EAR+IL D   E DAVCWNAMIDG
Sbjct: 175 LSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDG 213



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -1

Query: 279 QAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHIRSAGI 100
           +A+  F +M      P KF  PS+  AC + GAL +G  IH +  ++ +Q DG + ++ +
Sbjct: 285 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 344

Query: 99  QMYATCGYTREARQILDLSEESDAVCWNAMIDG 1
            MYA CG    A ++ +     +   WNAMI G
Sbjct: 345 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 377


>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/98 (55%), Positives = 72/98 (73%)
 Frame = -1

Query: 294 NNDVNQAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHI 115
           NN+  +AI  + +M++A++ PNKFT+P+LFKACT + A  EG+Q+H HVIK GL GD HI
Sbjct: 108 NNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHI 167

Query: 114 RSAGIQMYATCGYTREARQILDLSEESDAVCWNAMIDG 1
           RSAGIQMY + G    AR++L     SD +C+NAMIDG
Sbjct: 168 RSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDG 205


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/98 (55%), Positives = 73/98 (74%)
 Frame = -1

Query: 294 NNDVNQAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHI 115
           NN + +AI F+  M++ ++ PNKFT+P+LFKAC+ + A+ EG QIH HV+KHG+  D HI
Sbjct: 111 NNKLFKAIYFYGRMVI-DARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 114 RSAGIQMYATCGYTREARQILDLSEESDAVCWNAMIDG 1
           +SAGIQMYA+ G   +AR++   S ESD VCWN MIDG
Sbjct: 170 KSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDG 206



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/93 (27%), Positives = 52/93 (55%)
 Frame = -1

Query: 279 QAILFFREMIVANSIPNKFTFPSLFKACTDSGALVEGLQIHNHVIKHGLQGDGHIRSAGI 100
           +A+  F++M    + P +F   S+  AC++ GA+ +G  +H ++ ++ ++ D  + +A +
Sbjct: 277 EALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALL 336

Query: 99  QMYATCGYTREARQILDLSEESDAVCWNAMIDG 1
            MYA CG      ++ +  +E +   WNAMI G
Sbjct: 337 DMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369