BLASTX nr result

ID: Coptis24_contig00037093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037093
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25902.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_003635516.1| PREDICTED: uncharacterized protein LOC100853...   115   3e-24
gb|ACQ44231.1| hypothetical protein [Arabis alpina]                   114   8e-24
ref|XP_004143561.1| PREDICTED: uncharacterized protein LOC101211...   109   3e-22
gb|AAZ66929.1| 117M18_10 [Brassica rapa]                              105   3e-21

>emb|CBI25902.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/108 (57%), Positives = 75/108 (69%)
 Frame = -3

Query: 324 DGSSITNMDMDSLKTCACSFCLKAAYIWSDIHYQDTKGRISALKKSRKAVRSVIERSRNH 145
           D  S  N+D + LK C+C FCLKAAYIWSD+HYQD KGRI+ALKKS+K    +++RS   
Sbjct: 167 DACSNLNVDANMLKACSCPFCLKAAYIWSDLHYQDIKGRIAALKKSQKEASILVQRSCRA 226

Query: 144 GEFDKNVQGSLNKPKKLEHDLMGQWRSLFLHTEDILFRESTQLQSSLL 1
            E D +   + NK  KLE +LMGQWRSLFL   DIL  E+ QLQSS L
Sbjct: 227 KETDAHGHVNPNKASKLESELMGQWRSLFLSMGDILAHENGQLQSSFL 274


>ref|XP_003635516.1| PREDICTED: uncharacterized protein LOC100853094 [Vitis vinifera]
          Length = 347

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/103 (56%), Positives = 71/103 (68%)
 Frame = -3

Query: 324 DGSSITNMDMDSLKTCACSFCLKAAYIWSDIHYQDTKGRISALKKSRKAVRSVIERSRNH 145
           D  S  N+D + LK C+C FCLKAAYIWSD+HYQD KGRI+ALKKS+K    +++RS   
Sbjct: 236 DACSNLNVDANMLKACSCPFCLKAAYIWSDLHYQDIKGRIAALKKSQKEASILVQRSCRA 295

Query: 144 GEFDKNVQGSLNKPKKLEHDLMGQWRSLFLHTEDILFRESTQL 16
            E D +   + NK  KLE +LMGQWRSLFL   DIL  E+ QL
Sbjct: 296 KETDAHGHVNPNKASKLESELMGQWRSLFLSMGDILAHENGQL 338


>gb|ACQ44231.1| hypothetical protein [Arabis alpina]
          Length = 359

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
 Frame = -3

Query: 318 SSITNMDM--DSLKTCACSFCLKAAYIWSDIHYQDTKGRISALKKSRKAVRSVIERSRNH 145
           S++   D+  D LK+C+CSFCLKAAYIWSD+ YQD KGR+SALKKS+K   ++I R+   
Sbjct: 227 SNVNKQDLGNDLLKSCSCSFCLKAAYIWSDLQYQDIKGRLSALKKSQKEASNLIRRNDKE 286

Query: 144 GEFDKNVQGSLNKPKKLEHDLMGQWRSLFLHTEDILFRESTQLQSSLL 1
              D +   +     KLE DLMGQWRSLFL   DIL +ES QLQ+S L
Sbjct: 287 RPTDLHASINSATSAKLESDLMGQWRSLFLSMGDILAQESNQLQNSFL 334


>ref|XP_004143561.1| PREDICTED: uncharacterized protein LOC101211834 [Cucumis sativus]
           gi|449504893|ref|XP_004162324.1| PREDICTED:
           uncharacterized LOC101211834 [Cucumis sativus]
          Length = 189

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/108 (55%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = -3

Query: 318 SSITNMDM--DSLKTCACSFCLKAAYIWSDIHYQDTKGRISALKKSRKAVRSVIERSRNH 145
           S+  N DM  D LKTC+CSFCLKA+YIWSD+HYQD KGRISALKKS+K    + ++S   
Sbjct: 60  SNCANADMYDDLLKTCSCSFCLKASYIWSDLHYQDIKGRISALKKSQKDASILAQKSSKE 119

Query: 144 GEFDKNVQGSLNKPKKLEHDLMGQWRSLFLHTEDILFRESTQLQSSLL 1
            E   + QG+ +   KLE DL GQW SLF H ED    E  QLQSS +
Sbjct: 120 KE-TYHGQGN-SSSSKLELDLCGQWMSLFRHMEDTFAHEGNQLQSSFV 165


>gb|AAZ66929.1| 117M18_10 [Brassica rapa]
          Length = 283

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/102 (53%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
 Frame = -3

Query: 300 DMDSLKTCACSFCLKAAYIWSDIHYQDTKGRISALKKSRKAVRSVIERSRNHGEFDKNVQ 121
           D D +K+C+CSFCLKAAYIWSD+HYQD KGR+SALKKS+K    +I+R+    +      
Sbjct: 159 DDDLIKSCSCSFCLKAAYIWSDLHYQDIKGRLSALKKSQKVASGLIQRNDKEKQ-PTGFH 217

Query: 120 GSLNK--PKKLEHDLMGQWRSLFLHTEDILFRESTQLQSSLL 1
             +N     KLE DLM QWRSLFL   DIL  ES  LQ+S +
Sbjct: 218 SLVNSVGAAKLESDLMAQWRSLFLGMGDILAHESNHLQNSFM 259


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