BLASTX nr result

ID: Coptis24_contig00037092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037092
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510644.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|XP_002300660.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002510646.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002510645.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002307772.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24

>ref|XP_002510644.1| conserved hypothetical protein [Ricinus communis]
           gi|223551345|gb|EEF52831.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/107 (57%), Positives = 85/107 (79%)
 Frame = -2

Query: 330 LNVLNALFESVEDLLQLPLTRHALSIDRSNTSVNNVLDGSVRLLDICSVTKDVFCQMKEC 151
           L+ L  L+ESV+DLLQ+PL + A S +++  SV ++LDGSVRLLDICS TK+V  Q+K C
Sbjct: 44  LDGLKGLYESVDDLLQIPLAQRAFSHEQNVKSVQDILDGSVRLLDICSTTKEVLSQVKCC 103

Query: 150 LQDLQSSLRRNRGGEHGLQNEVGAYMIARKKVHKLIQKCLGDFKKAE 10
           LQDL+SSLRRN G +  L+NE+  YM++R+KVHK+++KCLG+ KK +
Sbjct: 104 LQDLESSLRRNNGCQSRLENEIKKYMVSREKVHKIVEKCLGNLKKLQ 150


>ref|XP_002300660.1| predicted protein [Populus trichocarpa] gi|222842386|gb|EEE79933.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/117 (49%), Positives = 81/117 (69%)
 Frame = -2

Query: 351 SSSTGHNLNVLNALFESVEDLLQLPLTRHALSIDRSNTSVNNVLDGSVRLLDICSVTKDV 172
           S+S  H L+ L  L+E V+D LQLPLT+  +S ++       +L+GS+ LLD+C  T+DV
Sbjct: 36  STSVYHKLSGLKVLYECVDDFLQLPLTQQTVSNEQHKERAEELLNGSLLLLDVCGTTRDV 95

Query: 171 FCQMKECLQDLQSSLRRNRGGEHGLQNEVGAYMIARKKVHKLIQKCLGDFKKAENKH 1
           F  MKECLQ L+SSLRR +GGE GL  EV AYM++RK+++K I+KC  + K  E K+
Sbjct: 96  FSSMKECLQQLESSLRRRKGGESGLATEVEAYMVSRKQINKTIRKCFRNLKSVEKKN 152


>ref|XP_002510646.1| conserved hypothetical protein [Ricinus communis]
           gi|223551347|gb|EEF52833.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 286

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/117 (47%), Positives = 86/117 (73%)
 Frame = -2

Query: 351 SSSTGHNLNVLNALFESVEDLLQLPLTRHALSIDRSNTSVNNVLDGSVRLLDICSVTKDV 172
           ++S  + L+ L  L++SVEDLLQLPLT+  L+ ++   SV+ VLDGS++L+D+CS T+D+
Sbjct: 44  AASPCNRLSGLKDLYDSVEDLLQLPLTQKDLTNEQHRKSVDEVLDGSLKLVDLCSTTRDI 103

Query: 171 FCQMKECLQDLQSSLRRNRGGEHGLQNEVGAYMIARKKVHKLIQKCLGDFKKAENKH 1
           F QMKECL++L+SSLRR +GGE GL +E   Y+ +RKK+++ + KC  + K  +  H
Sbjct: 104 FSQMKECLKELESSLRRRKGGESGLPSEFQTYIASRKKLNRAVGKCFRNLKTEKKNH 160


>ref|XP_002510645.1| conserved hypothetical protein [Ricinus communis]
           gi|223551346|gb|EEF52832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/114 (52%), Positives = 82/114 (71%)
 Frame = -2

Query: 351 SSSTGHNLNVLNALFESVEDLLQLPLTRHALSIDRSNTSVNNVLDGSVRLLDICSVTKDV 172
           S S    L  L  L+E V+DL QLPL + ALS +  +  V+++LDGS+RLLD+ S T+DV
Sbjct: 37  SGSLCQKLGGLKDLYERVDDLFQLPLIQQALSHEYQDKCVDDLLDGSLRLLDVYSTTRDV 96

Query: 171 FCQMKECLQDLQSSLRRNRGGEHGLQNEVGAYMIARKKVHKLIQKCLGDFKKAE 10
           F QMKEC+Q+L+SSLRR R  E  L+NEV AYM +RK+++K+I KC G+ K+ E
Sbjct: 97  FSQMKECIQELESSLRRKRTVESSLENEVKAYMTSRKRLNKVISKCFGNLKRME 150


>ref|XP_002307772.1| predicted protein [Populus trichocarpa] gi|222857221|gb|EEE94768.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/114 (50%), Positives = 77/114 (67%)
 Frame = -2

Query: 351 SSSTGHNLNVLNALFESVEDLLQLPLTRHALSIDRSNTSVNNVLDGSVRLLDICSVTKDV 172
           S+S  H L+ L  L+E VED LQLPLT+  LS ++       VL GS+ LLD+CS T+DV
Sbjct: 36  STSVYHKLSGLKVLYECVEDFLQLPLTQQTLSNEQQKERGEEVLSGSLLLLDMCSTTRDV 95

Query: 171 FCQMKECLQDLQSSLRRNRGGEHGLQNEVGAYMIARKKVHKLIQKCLGDFKKAE 10
           F  MKECLQ+L+SSLRR + GE G  +EV AY++ RK++ K I+KC  + K  E
Sbjct: 96  FSSMKECLQELESSLRRRKSGESGFASEVEAYIMCRKQLDKTIRKCFKNLKSME 149


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