BLASTX nr result

ID: Coptis24_contig00037090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037090
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8...   160   1e-37
emb|CAN67885.1| hypothetical protein VITISV_042572 [Vitis vinifera]   160   1e-37
ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   158   4e-37
ref|XP_003535589.1| PREDICTED: ABC transporter G family member 8...   157   6e-37
ref|XP_002329680.1| white-brown-complex ABC transporter family [...   153   1e-35

>ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]
          Length = 597

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/89 (82%), Positives = 81/89 (91%)
 Frame = -2

Query: 268 FVLFLSSLAPNYVAGTSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALL 89
           FVLFLSS+APNY+AGTSLVTIFLGAFFLFSGYFIS   +PKYWLFMH+ SMYKYALDA L
Sbjct: 468 FVLFLSSVAPNYIAGTSLVTIFLGAFFLFSGYFISKDSMPKYWLFMHFFSMYKYALDAFL 527

Query: 88  INEYSCLVSRCLVWFEDSKQCMVTGNDVL 2
           INEYSCLVSRCL+W+E++K CM TG DVL
Sbjct: 528 INEYSCLVSRCLLWYEENKTCMATGRDVL 556


>emb|CAN67885.1| hypothetical protein VITISV_042572 [Vitis vinifera]
          Length = 134

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/89 (82%), Positives = 81/89 (91%)
 Frame = -2

Query: 268 FVLFLSSLAPNYVAGTSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALL 89
           FVLFLSS+APNY+AGTSLVTIFLGAFFLFSGYFIS   +PKYWLFMH+ SMYKYALDA L
Sbjct: 5   FVLFLSSVAPNYIAGTSLVTIFLGAFFLFSGYFISKDSMPKYWLFMHFFSMYKYALDAFL 64

Query: 88  INEYSCLVSRCLVWFEDSKQCMVTGNDVL 2
           INEYSCLVSRCL+W+E++K CM TG DVL
Sbjct: 65  INEYSCLVSRCLLWYEENKTCMATGRDVL 93


>ref|XP_003556131.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           8-like [Glycine max]
          Length = 601

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/89 (79%), Positives = 82/89 (92%)
 Frame = -2

Query: 268 FVLFLSSLAPNYVAGTSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALL 89
           F LFLSSLAPNY+AGTSL+T+ L AFFLFSGYFIS + LPKYWLFMH+ SMYKYALDALL
Sbjct: 472 FALFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFFSMYKYALDALL 531

Query: 88  INEYSCLVSRCLVWFEDSKQCMVTGNDVL 2
           INEYSCLVSRCL+W+++++QCMVTG DVL
Sbjct: 532 INEYSCLVSRCLIWYQENEQCMVTGGDVL 560


>ref|XP_003535589.1| PREDICTED: ABC transporter G family member 8-like [Glycine max]
          Length = 599

 Score =  157 bits (398), Expect = 6e-37
 Identities = 70/89 (78%), Positives = 83/89 (93%)
 Frame = -2

Query: 268 FVLFLSSLAPNYVAGTSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALL 89
           FVLFLSSLAPNY+AGTSL+T+ L AFFLFSGYFIS + LPKYWLFMH+ SMYKYALDALL
Sbjct: 470 FVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFFSMYKYALDALL 529

Query: 88  INEYSCLVSRCLVWFEDSKQCMVTGNDVL 2
           INEYSCLV++CL+W+++++QCMVTG DVL
Sbjct: 530 INEYSCLVTKCLIWYQENEQCMVTGGDVL 558


>ref|XP_002329680.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222870588|gb|EEF07719.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 593

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/89 (77%), Positives = 79/89 (88%)
 Frame = -2

Query: 268 FVLFLSSLAPNYVAGTSLVTIFLGAFFLFSGYFISCKGLPKYWLFMHYISMYKYALDALL 89
           FVLFLSSLAPNY+AGTSLVTI LG FFLFSGYFIS   +PKYWLFMH+ SMYKYALDALL
Sbjct: 464 FVLFLSSLAPNYIAGTSLVTILLGGFFLFSGYFISQDSMPKYWLFMHFFSMYKYALDALL 523

Query: 88  INEYSCLVSRCLVWFEDSKQCMVTGNDVL 2
           INEYSCLV++C +W++++  CMVTG DVL
Sbjct: 524 INEYSCLVNKCFLWYQENSTCMVTGGDVL 552


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