BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037083
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]    82   6e-14
ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 376

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/76 (47%), Positives = 56/76 (73%)
 Frame = +2

Query: 2   YVWPNNYNLPFVLKSCGALKAFFEAEQIHSDVVKLGFGSNVYVQTALLDMYVKCSRIEIA 181
           Y  PN++ L FVLK+C  + AF E  Q+HS V+K GFGS+++VQT+L++ Y KC  I  A
Sbjct: 87  YPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFA 146

Query: 182 KQIFDTMTVKSVVSWT 229
           +++F+ M V+++V+WT
Sbjct: 147 RKVFEEMPVRNLVAWT 162


>ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 564

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/76 (47%), Positives = 56/76 (73%)
 Frame = +2

Query: 2   YVWPNNYNLPFVLKSCGALKAFFEAEQIHSDVVKLGFGSNVYVQTALLDMYVKCSRIEIA 181
           Y  PN++ L FVLK+C  + AF E  Q+HS V+K GFGS+++VQT+L++ Y KC  I  A
Sbjct: 87  YPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFA 146

Query: 182 KQIFDTMTVKSVVSWT 229
           +++F+ M V+++V+WT
Sbjct: 147 RKVFEEMPVRNLVAWT 162


>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/74 (48%), Positives = 49/74 (66%)
 Frame = +2

Query: 5   VWPNNYNLPFVLKSCGALKAFFEAEQIHSDVVKLGFGSNVYVQTALLDMYVKCSRIEIAK 184
           + PN +  PFVLK+C ALK   E  +IH D+ +L   SNVYV TAL+D Y KC  ++ AK
Sbjct: 115 ITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAK 174

Query: 185 QIFDTMTVKSVVSW 226
           ++FD M  + VV+W
Sbjct: 175 EVFDKMHKRDVVAW 188


>emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
          Length = 583

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/76 (46%), Positives = 51/76 (67%)
 Frame = +2

Query: 5   VWPNNYNLPFVLKSCGALKAFFEAEQIHSDVVKLGFGSNVYVQTALLDMYVKCSRIEIAK 184
           V  + +  PFVLK+C  L A  E EQIH+ ++KLGF S+VY+  +L+  Y  C R++ AK
Sbjct: 124 VMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSBVYINNSLVHFYATCDRLDFAK 183

Query: 185 QIFDTMTVKSVVSWTV 232
            +FD M+ +S+VSW V
Sbjct: 184 GVFDRMSERSLVSWNV 199


>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 616

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = +2

Query: 11  PNNYNLPFVLKSCGALKAFFEAEQIHSDVVKLGFGSNVYVQTALLDMYVKCSRIEIAKQI 190
           PN + LPFVLK+CG   A++EA  +H   +KLG GS V+VQ AL+ +YV C  I  A+++
Sbjct: 86  PNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKL 145

Query: 191 FDTMTVKSVVSW 226
           FD +T K++VSW
Sbjct: 146 FDDITDKTLVSW 157