BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037079
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    60   2e-07
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    56   4e-06

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/114 (31%), Positives = 62/114 (54%)
 Frame = -2

Query: 347  ILFQELKAMAEGLRLSVELGLRRLYA*SDSLRVVCIMRGSEQPPWYCLNVAVAIARTCIM 168
            IL  EL A+ +GL ++ E+G+  L   SDSL  + ++  +    ++   V +   +  + 
Sbjct: 1181 ILLAELTALHQGLIMAAEMGIEELACYSDSLLTINLITRTTSK-YHTYAVLIQDIKDLLS 1239

Query: 167  FDVFRVDHVFRECNQVADYLAGVCKSQVDNFVIYSPLDQKLATIVEMDCKGTLY 6
               F V H FRE NQ ADYLA +  S  +  ++++   Q+L  +++MD  GTL+
Sbjct: 1240 AHNFSVYHCFREGNQCADYLAKLGASSNEECLVHASACQELLVLIQMDAIGTLF 1293


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
 Frame = -2

Query: 347 ILFQELKAMAEGLRLSVELGLRRLYA*SDSLRVVCIMRGSEQPPWYCLNVAVAIARTCIM 168
           +   EL A+  GL LS+ LG++ ++  SDS+ VV  +   +  P   +     I +    
Sbjct: 355 VFLAELWAIWRGLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKK 413

Query: 167 FDVFRVDHVFRECNQVADYLAGVCKSQVDNFVIYSPLD--QKLATIVEMDCKGTLY 6
           FD +++ H +RE N+ AD+LA +    + N V+ SP+D    L+ I+E D KGT Y
Sbjct: 414 FDKYQISHSWRETNRAADHLAKM--DLLANDVVLSPVDFPPSLSRIIEDDAKGTKY 467