BLASTX nr result

ID: Coptis24_contig00037077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037077
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532949.1| DNA binding protein, putative [Ricinus commu...    74   2e-11
ref|XP_004144446.1| PREDICTED: uncharacterized protein LOC101207...    70   2e-10
ref|XP_003529858.1| PREDICTED: uncharacterized protein LOC100819...    68   7e-10
ref|XP_002331191.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002271218.1| PREDICTED: uncharacterized protein LOC100260...    65   6e-09

>ref|XP_002532949.1| DNA binding protein, putative [Ricinus communis]
           gi|223527278|gb|EEF29433.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 487

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = -3

Query: 241 MDAKTPAYLQSSTFISSNKESSALEGNDRFFMKNKEAPFLDTFPDPLCKLNLKETSDFVN 62
           MD  TP Y Q+  F +SN E +    +   + K+K+ PF DTF DPLCKLNLKETS+FV 
Sbjct: 1   MDLSTPKYFQAP-FFASNGEPTLETHSTSLYGKSKDHPFADTFQDPLCKLNLKETSEFVK 59

Query: 61  SLPMTSGNSSESR 23
           S PM + +S E R
Sbjct: 60  SFPMANSSSKECR 72


>ref|XP_004144446.1| PREDICTED: uncharacterized protein LOC101207750 [Cucumis sativus]
           gi|449519798|ref|XP_004166921.1| PREDICTED:
           uncharacterized protein LOC101225327 [Cucumis sativus]
          Length = 469

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/86 (50%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
 Frame = -3

Query: 241 MDAKTPAYLQSST--FISSNKESSALEGNDRFFMKNKEAPFLDTFPDPLCKLNLKETSDF 68
           MD  +P Y  S       SN E   LEG   F+ K K+ PF DTF DPLCKLNLKETS+F
Sbjct: 1   MDLTSPKYFHSPPPPLFQSNGEPP-LEGRRSFYGKTKDDPFSDTFHDPLCKLNLKETSEF 59

Query: 67  VNSLPMT-----SGNSSESRKGVSSV 5
           V SLPM      S ++   R GV+SV
Sbjct: 60  VKSLPMANNVTCSVSTQRRRDGVNSV 85


>ref|XP_003529858.1| PREDICTED: uncharacterized protein LOC100819894 [Glycine max]
          Length = 469

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/80 (42%), Positives = 47/80 (58%)
 Frame = -3

Query: 241 MDAKTPAYLQSSTFISSNKESSALEGNDRFFMKNKEAPFLDTFPDPLCKLNLKETSDFVN 62
           MD  +  + Q  + ++ + E+   E N   + K+K+ PF D FPDPLCKLNLKETS+FV 
Sbjct: 1   MDLPSHKFFQPPSALAPHGEALLTESNMSLYGKSKDDPFADDFPDPLCKLNLKETSEFVK 60

Query: 61  SLPMTSGNSSESRKGVSSVQ 2
           SLP+   N     +G S  Q
Sbjct: 61  SLPLPMPNGRAESRGHSVSQ 80


>ref|XP_002331191.1| predicted protein [Populus trichocarpa] gi|222873312|gb|EEF10443.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -3

Query: 241 MDAKTPAYLQSS-TFISSNKESSALEGNDRFFMKNKEAPFLDTFPDPLCKLNLKETSDFV 65
           MD   P Y Q    F+ + + +   + +  F++K KE PF D+F DPLCKLNLKETS+FV
Sbjct: 1   MDLTAPKYFQPPPVFVPNGEPALETKTSTSFYVKVKENPFADSFQDPLCKLNLKETSEFV 60

Query: 64  NSLPMTSGNSSESRKGVSSV 5
            S PM   NSS   +G   V
Sbjct: 61  KSFPM--ANSSAECRGFLEV 78


>ref|XP_002271218.1| PREDICTED: uncharacterized protein LOC100260045 [Vitis vinifera]
          Length = 481

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/79 (45%), Positives = 48/79 (60%)
 Frame = -3

Query: 241 MDAKTPAYLQSSTFISSNKESSALEGNDRFFMKNKEAPFLDTFPDPLCKLNLKETSDFVN 62
           MD  +P Y+Q+    +S  E+  LEG+      +K  PF D F DPLCKLNLKETS+FV 
Sbjct: 1   MDLTSPRYIQAPPLFASLGETP-LEGDTSLCGNSKGNPFADAFSDPLCKLNLKETSEFVK 59

Query: 61  SLPMTSGNSSESRKGVSSV 5
           S PM + N++E  +G   V
Sbjct: 60  SFPM-ANNAAEGGRGFLDV 77


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