BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037032
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   149   2e-34
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   120   2e-25

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/97 (74%), Positives = 80/97 (82%)
 Frame = +1

Query: 7   LMKKIKDEEGYILDTDFSLHDVDEERECIPIGHSELLAISFGLISTEPQVTVRVTKNLRV 186
           LMKKI +EEG  L+ DFSLHDVDEEREC+PIGHSELLA SFGLIST+   T+RVTKNLR+
Sbjct: 563 LMKKI-EEEGTRLNLDFSLHDVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRM 621

Query: 187 CRSCHSFVKIISKKVRREIILKDPGCFHHFKDGSCSC 297
           C +CH   K ISK V REII+KDP CFHHFKDG CSC
Sbjct: 622 CGNCHDSAKAISKIVEREIIIKDPSCFHHFKDGFCSC 658


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/97 (74%), Positives = 80/97 (82%)
 Frame = +1

Query: 7   LMKKIKDEEGYILDTDFSLHDVDEERECIPIGHSELLAISFGLISTEPQVTVRVTKNLRV 186
           LMKKI +EEG  L+ DFSLHDVDEEREC+PIGHSELLA SFGLIST+   T+RVTKNLR+
Sbjct: 635 LMKKI-EEEGTRLNLDFSLHDVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRM 693

Query: 187 CRSCHSFVKIISKKVRREIILKDPGCFHHFKDGSCSC 297
           C +CH   K ISK V REII+KDP CFHHFKDG CSC
Sbjct: 694 CGNCHDSAKAISKIVEREIIIKDPSCFHHFKDGFCSC 730


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/97 (72%), Positives = 79/97 (81%)
 Frame = +1

Query: 7   LMKKIKDEEGYILDTDFSLHDVDEERECIPIGHSELLAISFGLISTEPQVTVRVTKNLRV 186
           LMK++ +E+G   + DFSLHDVDEEREC+PIGHSELLAISFGLISTE   T+R+TKNLRV
Sbjct: 530 LMKEM-EEDGSKPNPDFSLHDVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRV 588

Query: 187 CRSCHSFVKIISKKVRREIILKDPGCFHHFKDGSCSC 297
           C SCH   K ISK V REII+KDP  FHHFKDG CSC
Sbjct: 589 CHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCSC 625


>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/97 (63%), Positives = 74/97 (76%)
 Frame = +1

Query: 7   LMKKIKDEEGYILDTDFSLHDVDEERECIPIGHSELLAISFGLISTEPQVTVRVTKNLRV 186
           LMKK+ + E     + FS H VD ERECI IGHSE+LA+SFGLI T+P  T+R+TKNLR+
Sbjct: 564 LMKKV-NAEAQRPASGFSFHGVDAERECIQIGHSEMLALSFGLICTQPGATIRITKNLRM 622

Query: 187 CRSCHSFVKIISKKVRREIILKDPGCFHHFKDGSCSC 297
           CR CH   K++SK V REII+KDP CFHHFKDG CSC
Sbjct: 623 CRGCHDSTKLVSKIVEREIIIKDPNCFHHFKDGFCSC 659


>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1    EFLMKKIKDEEGYILDTDFSLHDVDEE-RECIPIGHSELLAISFGLISTEPQVTVRVTKN 177
            E LMK+I++E  Y+ DTDF+L DV+EE +E     HSE LAI+FGLIST P  T+RV KN
Sbjct: 1470 EDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKN 1529

Query: 178  LRVCRSCHSFVKIISKKVRREIILKDPGCFHHFKDGSCSC 297
            LRVC  CHS +K ISK  +REI+L+D   FHHF++G+CSC
Sbjct: 1530 LRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSC 1569