BLASTX nr result

ID: Coptis24_contig00037027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037027
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001781718.1| cellulose synthase-like D6, glycosyltransfer...    69   2e-16
ref|XP_002988822.1| cellulose synthase-like D1-2, glycosyltransf...    63   4e-16
ref|XP_002964575.1| cellulose synthase-like D1-2, glycosyltransf...    63   4e-16
ref|XP_002436356.1| hypothetical protein SORBIDRAFT_10g000980 [S...    65   8e-16
gb|AFM37967.1| cellulose synthase-like protein D [Cunninghamia l...    62   1e-15

>ref|XP_001781718.1| cellulose synthase-like D6, glycosyltransferase family 2 protein
            [Physcomitrella patens subsp. patens]
            gi|114509164|gb|ABI75156.1| cellulose synthase-like D6
            [Physcomitrella patens] gi|162666802|gb|EDQ53447.1|
            cellulose synthase-like D6, glycosyltransferase family 2
            protein [Physcomitrella patens subsp. patens]
          Length = 1165

 Score = 69.3 bits (168), Expect(2) = 2e-16
 Identities = 34/48 (70%), Positives = 39/48 (81%)
 Frame = -1

Query: 373  VLKC*NAPIEIFYSRNNTLLASPCLKFLQRVVYLSVGIYPLTSIFLVV 230
            VL+     +EIF+SRNN LLASP LKFLQR+ YL+VGIYP TSIFLVV
Sbjct: 906  VLRWATGSVEIFFSRNNALLASPRLKFLQRIAYLNVGIYPFTSIFLVV 953



 Score = 40.8 bits (94), Expect(2) = 2e-16
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3

Query: 230  LVVYCFLPTLALFSGHYILETLDPMFLLY 144
            LVVYCFLP L+LFSG +I+  L+  FL+Y
Sbjct: 951  LVVYCFLPALSLFSGQFIVYQLNITFLVY 979


>ref|XP_002988822.1| cellulose synthase-like D1-2, glycosyltransferase family 2 protein
            [Selaginella moellendorffii] gi|300143393|gb|EFJ10084.1|
            cellulose synthase-like D1-2, glycosyltransferase family
            2 protein [Selaginella moellendorffii]
          Length = 1129

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = -1

Query: 373  VLKC*NAPIEIFYSRNNTLLASPCLKFLQRVVYLSVGIYPLTSIFLVV 230
            VL+     +EIF+SRNN L A+  LKFLQR+ YL+VG+YP TSIFLVV
Sbjct: 872  VLRWATGSVEIFFSRNNALFANTRLKFLQRIAYLNVGVYPFTSIFLVV 919



 Score = 46.2 bits (108), Expect(2) = 4e-16
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -3

Query: 230  LVVYCFLPTLALFSGHYILETLDPMFLLYHFI 135
            LVVYCFLP L+LF+G +I++TL   FL+Y F+
Sbjct: 917  LVVYCFLPALSLFTGEFIVQTLSTTFLVYLFV 948


>ref|XP_002964575.1| cellulose synthase-like D1-2, glycosyltransferase family 2 protein
            [Selaginella moellendorffii] gi|300168304|gb|EFJ34908.1|
            cellulose synthase-like D1-2, glycosyltransferase family
            2 protein [Selaginella moellendorffii]
          Length = 1127

 Score = 63.2 bits (152), Expect(2) = 4e-16
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = -1

Query: 373  VLKC*NAPIEIFYSRNNTLLASPCLKFLQRVVYLSVGIYPLTSIFLVV 230
            VL+     +EIF+SRNN L A+  LKFLQR+ YL+VG+YP TSIFLVV
Sbjct: 870  VLRWATGSVEIFFSRNNALFANTRLKFLQRIAYLNVGVYPFTSIFLVV 917



 Score = 46.2 bits (108), Expect(2) = 4e-16
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -3

Query: 230  LVVYCFLPTLALFSGHYILETLDPMFLLYHFI 135
            LVVYCFLP L+LF+G +I++TL   FL+Y F+
Sbjct: 915  LVVYCFLPALSLFTGEFIVQTLSTTFLVYLFV 946


>ref|XP_002436356.1| hypothetical protein SORBIDRAFT_10g000980 [Sorghum bicolor]
            gi|241914579|gb|EER87723.1| hypothetical protein
            SORBIDRAFT_10g000980 [Sorghum bicolor]
          Length = 1179

 Score = 64.7 bits (156), Expect(2) = 8e-16
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = -1

Query: 373  VLKC*NAPIEIFYSRNNTLLASPCLKFLQRVVYLSVGIYPLTSIFLVV 230
            VL+     +EIF+SRNN LLAS  +KFLQR+ YL+VGIYP TSIFL+V
Sbjct: 921  VLRWATGSVEIFFSRNNALLASRRMKFLQRIAYLNVGIYPFTSIFLIV 968



 Score = 43.5 bits (101), Expect(2) = 8e-16
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = -3

Query: 230  LVVYCFLPTLALFSGHYILETLDPMFLLY 144
            L+VYCFLP L+LFSG +I++TL+  FL Y
Sbjct: 966  LIVYCFLPALSLFSGQFIVKTLNVAFLTY 994


>gb|AFM37967.1| cellulose synthase-like protein D [Cunninghamia lanceolata]
          Length = 1131

 Score = 62.4 bits (150), Expect(2) = 1e-15
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = -1

Query: 373  VLKC*NAPIEIFYSRNNTLLASPCLKFLQRVVYLSVGIYPLTSIFLVV 230
            VL+     +EIF+SRNN LL S  +KFLQ++ YL+VGIYP TSIFL+V
Sbjct: 873  VLRWATGSVEIFFSRNNALLGSSRIKFLQKIAYLNVGIYPFTSIFLIV 920



 Score = 45.4 bits (106), Expect(2) = 1e-15
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -3

Query: 230  LVVYCFLPTLALFSGHYILETLDPMFLLYHFI 135
            L+VYCFLP L+LFSG +I++TL+  FL+Y  I
Sbjct: 918  LIVYCFLPALSLFSGQFIVQTLNVSFLIYLLI 949


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