BLASTX nr result

ID: Coptis24_contig00037026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037026
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141849.1| PREDICTED: regulator of telomere elongation ...   173   1e-41
ref|XP_003542103.1| PREDICTED: regulator of telomere elongation ...   170   1e-40
emb|CBI36156.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002528200.1| regulator of telomere elongation helicase 1 ...   166   1e-39
ref|XP_003566832.1| PREDICTED: regulator of telomere elongation ...   164   7e-39

>ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like
           [Cucumis sativus]
          Length = 1054

 Score =  173 bits (439), Expect = 1e-41
 Identities = 77/111 (69%), Positives = 93/111 (83%)
 Frame = -1

Query: 346 VVITGMPFPTWNDPKVRLKRDFLDHPSDSPKKELKALTGGEWYNQQASRAVNQAVGRVIR 167
           V+ITGMPF + NDPKVRLKR +LDH S S +   + +TG +WY QQA RAVNQAVGRVIR
Sbjct: 609 VIITGMPFASRNDPKVRLKRGYLDHQSQSQRGNCQIMTGEDWYTQQAMRAVNQAVGRVIR 668

Query: 166 HRHDYGAIIFCDERFSHAKNQHQMSIWLQPYIKCYSNFGEVAFTLTRFFRD 14
           HRHDYGAIIFCDERF+H+  Q Q+S+W+QP+IKCYS FG+V +TLTRFFR+
Sbjct: 669 HRHDYGAIIFCDERFAHSSRQSQISVWIQPHIKCYSKFGDVVYTLTRFFRN 719


>ref|XP_003542103.1| PREDICTED: regulator of telomere elongation helicase 1-like
           [Glycine max]
          Length = 1001

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/115 (71%), Positives = 92/115 (80%), Gaps = 3/115 (2%)
 Frame = -1

Query: 346 VVITGMPFPTWNDPKVRLKRDFLDH---PSDSPKKELKALTGGEWYNQQASRAVNQAVGR 176
           VVITG+PF T  DPKVRLKR++LD    P     K +  LTG EWYNQQASRAVNQAVGR
Sbjct: 608 VVITGLPFATSTDPKVRLKREYLDQQSRPQGELFKVMPVLTGDEWYNQQASRAVNQAVGR 667

Query: 175 VIRHRHDYGAIIFCDERFSHAKNQHQMSIWLQPYIKCYSNFGEVAFTLTRFFRDI 11
           VIRHR+DYGAIIFCDERFSH   Q Q+S W+QP+IKC+S FGEV FTLTRFFRD+
Sbjct: 668 VIRHRYDYGAIIFCDERFSHPHRQSQVSRWIQPHIKCFSRFGEVVFTLTRFFRDV 722


>emb|CBI36156.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  169 bits (429), Expect = 2e-40
 Identities = 80/111 (72%), Positives = 90/111 (81%)
 Frame = -1

Query: 346 VVITGMPFPTWNDPKVRLKRDFLDHPSDSPKKELKALTGGEWYNQQASRAVNQAVGRVIR 167
           VVITG+PF    DPKVRLKR+FLD    S K+  K LTG EWY QQASRAVNQAVGRVIR
Sbjct: 650 VVITGIPFAMRTDPKVRLKREFLDQRGLSQKEGCKVLTGEEWYTQQASRAVNQAVGRVIR 709

Query: 166 HRHDYGAIIFCDERFSHAKNQHQMSIWLQPYIKCYSNFGEVAFTLTRFFRD 14
           H HD+GAIIFCDERF+H   Q Q+S+W+QP+IKCYS FG+V FTLTRFFRD
Sbjct: 710 HCHDFGAIIFCDERFAHPNRQSQISLWIQPHIKCYSKFGDVVFTLTRFFRD 760


>ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
           [Ricinus communis] gi|223532412|gb|EEF34207.1| regulator
           of telomere elongation helicase 1 rtel1, putative
           [Ricinus communis]
          Length = 1049

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/115 (69%), Positives = 95/115 (82%), Gaps = 4/115 (3%)
 Frame = -1

Query: 346 VVITGMPFPTWNDPKVRLKRDFLDHP----SDSPKKELKALTGGEWYNQQASRAVNQAVG 179
           V+I GMPFP+ NDPKVRLKR+FLD       D+ K +L  LTG  WY QQASRAVNQAVG
Sbjct: 610 VMIIGMPFPSRNDPKVRLKREFLDEQLCLQRDAYKSQL--LTGESWYTQQASRAVNQAVG 667

Query: 178 RVIRHRHDYGAIIFCDERFSHAKNQHQMSIWLQPYIKCYSNFGEVAFTLTRFFRD 14
           RVIRHRHDYGAIIFCDERF+H+ +Q Q+S+W+QP+IKC+S FG+V FTL+RFFRD
Sbjct: 668 RVIRHRHDYGAIIFCDERFAHSNSQSQISLWIQPHIKCHSKFGDVVFTLSRFFRD 722


>ref|XP_003566832.1| PREDICTED: regulator of telomere elongation helicase 1-like
           [Brachypodium distachyon]
          Length = 872

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/111 (70%), Positives = 87/111 (78%)
 Frame = -1

Query: 346 VVITGMPFPTWNDPKVRLKRDFLDHPSDSPKKELKALTGGEWYNQQASRAVNQAVGRVIR 167
           V++TGMPF T  DPKVRLKRD+LD  +    K  K LTG EWY QQA+RAVNQAVGRVIR
Sbjct: 498 VIVTGMPFSTPTDPKVRLKRDYLDKQATPSNKNPKGLTGEEWYVQQAARAVNQAVGRVIR 557

Query: 166 HRHDYGAIIFCDERFSHAKNQHQMSIWLQPYIKCYSNFGEVAFTLTRFFRD 14
           HRHDYGAII+CDERF     Q QMS WL+PYIKCYS +GEV  TLT+FFRD
Sbjct: 558 HRHDYGAIIYCDERFVWPNYQSQMSYWLKPYIKCYSKYGEVVQTLTKFFRD 608


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