BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037022
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26289.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ...   182   2e-44

>emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/134 (71%), Positives = 114/134 (85%)
 Frame = -2

Query: 403 SNVYASAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARML 224
           SN+YASAGKW DVARVR+ L+EKG  K PGSSS++VNG I+EFT+ DESHP+MTHIA ML
Sbjct: 506 SNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALML 565

Query: 223 EEMCCRLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHGDQIRVIKNL 44
           +EM CR  DAGH+P+LS+VLLDVDE EKE+ L+RHSEKLAIAFGLI+T     IRV+KNL
Sbjct: 566 QEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNL 625

Query: 43  RMCADCHTFAKFVS 2
           RMC+DCH+FAK  S
Sbjct: 626 RMCSDCHSFAKMAS 639


>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
            [Vitis vinifera]
          Length = 836

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/134 (71%), Positives = 114/134 (85%)
 Frame = -2

Query: 403  SNVYASAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARML 224
            SN+YASAGKW DVARVR+ L+EKG  K PGSSS++VNG I+EFT+ DESHP+MTHIA ML
Sbjct: 674  SNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALML 733

Query: 223  EEMCCRLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHGDQIRVIKNL 44
            +EM CR  DAGH+P+LS+VLLDVDE EKE+ L+RHSEKLAIAFGLI+T     IRV+KNL
Sbjct: 734  QEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNL 793

Query: 43   RMCADCHTFAKFVS 2
            RMC+DCH+FAK  S
Sbjct: 794  RMCSDCHSFAKMAS 807


>ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1|
            predicted protein [Populus trichocarpa]
          Length = 845

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/134 (70%), Positives = 114/134 (85%)
 Frame = -2

Query: 403  SNVYASAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARML 224
            SN+YASAG+W DVA+VR+ LKEKG HK PGSSSIE+NG I EFT  DESHP+MTHI  ML
Sbjct: 683  SNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPML 742

Query: 223  EEMCCRLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHGDQIRVIKNL 44
            +E+CCRL+D G+VP+L++VLLDV+E EKE+ L+RHSEKLAIAF LIST  G  IRV KNL
Sbjct: 743  KEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNL 802

Query: 43   RMCADCHTFAKFVS 2
            R+C+DCH+FAK VS
Sbjct: 803  RICSDCHSFAKLVS 816


>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
            [Glycine max]
          Length = 836

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/134 (70%), Positives = 113/134 (84%)
 Frame = -2

Query: 403  SNVYASAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARML 224
            SN+YASAGKW DVARVR+Q+KEKG  K PGSSSIEV G I+EFT+ DESH + THI  ML
Sbjct: 674  SNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLML 733

Query: 223  EEMCCRLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHGDQIRVIKNL 44
            EE+ CRL +AG+VP+ ++VLLDVDE EKEH L+RHSEKLA+A+GLI+T  G  IRV+KNL
Sbjct: 734  EEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNL 793

Query: 43   RMCADCHTFAKFVS 2
            RMC+DCH+FAK VS
Sbjct: 794  RMCSDCHSFAKLVS 807


>ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512083|gb|AES93706.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/134 (64%), Positives = 109/134 (81%)
 Frame = -2

Query: 403  SNVYASAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARML 224
            SN+YASAGKW DVARVR+Q+KEKG+ K  GSSSIEV+G I EFT+ DESH +   I  ML
Sbjct: 666  SNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLML 725

Query: 223  EEMCCRLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHGDQIRVIKNL 44
            +E+ CR+   G+VP+ ++VL+DVDE EKEH L+RHSEKLA+A+GLI+T  G  IRV+KNL
Sbjct: 726  QEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNL 785

Query: 43   RMCADCHTFAKFVS 2
            RMC+DCH+FAK VS
Sbjct: 786  RMCSDCHSFAKLVS 799