BLASTX nr result

ID: Coptis24_contig00037013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037013
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237660.1| uncharacterized protein LOC100305596 [Glycin...   147   7e-34
ref|NP_001235935.1| uncharacterized protein LOC100500292 [Glycin...   147   1e-33
ref|XP_002266022.1| PREDICTED: thioredoxin M-type, chloroplastic...   140   1e-31
gb|AFK40516.1| unknown [Lotus japonicus]                              138   4e-31
gb|ABK95335.1| unknown [Populus trichocarpa]                          138   5e-31

>ref|NP_001237660.1| uncharacterized protein LOC100305596 [Glycine max]
           gi|255626027|gb|ACU13358.1| unknown [Glycine max]
          Length = 181

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/114 (62%), Positives = 85/114 (74%), Gaps = 3/114 (2%)
 Frame = -3

Query: 333 KLNLPTHKGLTKTYN---LCFPNXXXXXXSNRGSQIVCKAREAVDQVLVVTDSNWETSVI 163
           KL  PTH+G  K+     L +P       + R S+ VC AREAV++V VVTDS+W   VI
Sbjct: 30  KLVFPTHRGFKKSLQNSTLSYPYLYSTGAAYRKSRFVCNAREAVNEVKVVTDSSWNNLVI 89

Query: 162 SSETPVLVEFWAPWCGPCRMIAPEVDELAKEYAGKLACYKLNSDGGPIIASQYG 1
           +SETPVLVEFWAPWCGPCRMIAP +DELAKEYAGK+AC+KLN+D  P IA+QYG
Sbjct: 90  ASETPVLVEFWAPWCGPCRMIAPAIDELAKEYAGKIACFKLNTDDSPNIATQYG 143


>ref|NP_001235935.1| uncharacterized protein LOC100500292 [Glycine max]
           gi|255629952|gb|ACU15328.1| unknown [Glycine max]
          Length = 185

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/114 (62%), Positives = 85/114 (74%), Gaps = 3/114 (2%)
 Frame = -3

Query: 333 KLNLPTHKGLTKTYN---LCFPNXXXXXXSNRGSQIVCKAREAVDQVLVVTDSNWETSVI 163
           KL  PTH+G  K+     L  P+      + R S+ VC AREAV++V VVTDS+W   VI
Sbjct: 30  KLVFPTHRGFKKSLQNSTLSCPSLYSTGAAYRRSRFVCNAREAVNEVKVVTDSSWNNLVI 89

Query: 162 SSETPVLVEFWAPWCGPCRMIAPEVDELAKEYAGKLACYKLNSDGGPIIASQYG 1
           +SETPVLVEFWAPWCGPCRMIAP +DELAK+YAGK+ACYKLN+D  P IA+QYG
Sbjct: 90  ASETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKIACYKLNTDDSPNIATQYG 143


>ref|XP_002266022.1| PREDICTED: thioredoxin M-type, chloroplastic [Vitis vinifera]
           gi|302142749|emb|CBI19952.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  140 bits (353), Expect = 1e-31
 Identities = 73/116 (62%), Positives = 85/116 (73%), Gaps = 5/116 (4%)
 Frame = -3

Query: 333 KLNLPTHKGLTKTYNLCFPNXXXXXXSN-----RGSQIVCKAREAVDQVLVVTDSNWETS 169
           KLNLPT KG+ K   L F +       +     R S+IVCKAREAVD+V VVTDS+W   
Sbjct: 31  KLNLPTCKGV-KPSILSFSSSPSSLDYSFHRICRKSRIVCKAREAVDEVQVVTDSSWSNV 89

Query: 168 VISSETPVLVEFWAPWCGPCRMIAPEVDELAKEYAGKLACYKLNSDGGPIIASQYG 1
           VI+SE PVLVEFWAPWCGPCRMIAP +DELAKEYAGK+ C K+N+D  P IA+QYG
Sbjct: 90  VIASENPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIVCCKVNTDDCPNIATQYG 145


>gb|AFK40516.1| unknown [Lotus japonicus]
          Length = 181

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
 Frame = -3

Query: 333 KLNLPTHKGLTKTYNLCF----PNXXXXXXSNRGSQIVCKAREAVDQVLVVTDSNWETSV 166
           K+  PT++G  K ++       P+      +NR   ++C AREAV++V VVT+S+W   V
Sbjct: 29  KVVFPTYRGFKKCFSKSATSSNPSLYSAAGTNRKFSVICNAREAVNEVKVVTESSWNDLV 88

Query: 165 ISSETPVLVEFWAPWCGPCRMIAPEVDELAKEYAGKLACYKLNSDGGPIIASQYG 1
           I+SE PVLV+FWAPWCGPCRMIAP +DELAKEYAGK+ACYKLN+D  P IA+QYG
Sbjct: 89  IASEIPVLVDFWAPWCGPCRMIAPLIDELAKEYAGKIACYKLNTDDSPNIATQYG 143


>gb|ABK95335.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/113 (60%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
 Frame = -3

Query: 333 KLNLPTHKGLTKTYNLCFPNXXXXXXS---NRGSQIVCKAREAVDQVLVVTDSNWETSVI 163
           KL LPT +GL ++ +L FP+      +   N  S IVCKA+EAV  V VVTDS+W++ VI
Sbjct: 31  KLKLPTGRGLRRSSSLSFPSSFSSSYASVKNHKSTIVCKAQEAVGVVQVVTDSSWDSLVI 90

Query: 162 SSETPVLVEFWAPWCGPCRMIAPEVDELAKEYAGKLACYKLNSDGGPIIASQY 4
             E PVLVEFWAPWCGPCRMI P +DELA EYAGK+AC+K+N+D  P IASQY
Sbjct: 91  GCEIPVLVEFWAPWCGPCRMITPVIDELAAEYAGKIACFKVNTDDCPNIASQY 143


Top