BLASTX nr result

ID: Coptis24_contig00036972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036972
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877750.1| short-chain dehydrogenase/reductase family p...    71   8e-11
ref|XP_002522313.1| short-chain dehydrogenase, putative [Ricinus...    70   1e-10
ref|NP_566935.1| Rossmann-fold NAD(P)-binding domain-containing ...    70   2e-10
gb|AAM64907.1| unknown [Arabidopsis thaliana]                          70   2e-10
emb|CAB62485.1| putative protein [Arabidopsis thaliana]                70   2e-10

>ref|XP_002877750.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297323588|gb|EFH54009.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 274

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = -3

Query: 126 MRNMATSSASPKGIAAVVGVGPKLGRSIARKFAHEGYTVEI 4
           MRN+ +SS+S KGIAAVVGVGPKLGRSIARKFAHEGYTV I
Sbjct: 2   MRNVGSSSSSGKGIAAVVGVGPKLGRSIARKFAHEGYTVAI 42


>ref|XP_002522313.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223538391|gb|EEF39997.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 264

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = -3

Query: 126 MRNMATSSASPKGIAAVVGVGPKLGRSIARKFAHEGYTVEI 4
           MR+MA SSA+PKGIAA+VGVGPKLGRSIARKFAHEGYTV I
Sbjct: 1   MRSMA-SSATPKGIAAIVGVGPKLGRSIARKFAHEGYTVAI 40


>ref|NP_566935.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|16612320|gb|AAL27518.1|AF439850_1
           AT3g50560/T20E23_160 [Arabidopsis thaliana]
           gi|21928097|gb|AAM78077.1| AT3g50560/T20E23_160
           [Arabidopsis thaliana] gi|332645160|gb|AEE78681.1|
           Rossmann-fold NAD(P)-binding domain-containing protein
           [Arabidopsis thaliana]
          Length = 272

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 126 MRNMATSSASPKGIAAVVGVGPKLGRSIARKFAHEGYTVEI 4
           MRN+ +SS+  KGIAAVVGVGPKLGRSIARKFAHEGYTV I
Sbjct: 2   MRNVGSSSSGSKGIAAVVGVGPKLGRSIARKFAHEGYTVAI 42


>gb|AAM64907.1| unknown [Arabidopsis thaliana]
          Length = 272

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 126 MRNMATSSASPKGIAAVVGVGPKLGRSIARKFAHEGYTVEI 4
           MRN+ +SS+  KGIAAVVGVGPKLGRSIARKFAHEGYTV I
Sbjct: 2   MRNVGSSSSGSKGIAAVVGVGPKLGRSIARKFAHEGYTVAI 42


>emb|CAB62485.1| putative protein [Arabidopsis thaliana]
          Length = 267

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 126 MRNMATSSASPKGIAAVVGVGPKLGRSIARKFAHEGYTVEI 4
           MRN+ +SS+  KGIAAVVGVGPKLGRSIARKFAHEGYTV I
Sbjct: 2   MRNVGSSSSGSKGIAAVVGVGPKLGRSIARKFAHEGYTVAI 42


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