BLASTX nr result

ID: Coptis24_contig00036963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036963
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putati...    72   5e-11
ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR...    70   1e-10
emb|CBI32004.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine...    70   2e-10
ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223540615|gb|EEF42178.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 749

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = +1

Query: 223 MANVHAFIGFLLQLLIIVLFCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNFCY 402
           M N+   +  LL LLI ++  P  + QL+PSE+RILF+VQ+LLEYP   Q W NWTNFC+
Sbjct: 1   MENLRISLCLLLSLLIPIILAPVSVGQLSPSETRILFQVQKLLEYPQVLQRWTNWTNFCW 60


>ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At1g14390 [Vitis
           vinifera]
          Length = 746

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +1

Query: 232 VHAFIGFLLQLLIIVLFCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNFCY 402
           + +F  F   L  +++F P  + QLTP+E RIL +VQQLLEYP A QGWNNWT+FCY
Sbjct: 1   MESFWVFFCFLFSVIIF-PVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFCY 56


>emb|CBI32004.3| unnamed protein product [Vitis vinifera]
          Length = 720

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +1

Query: 232 VHAFIGFLLQLLIIVLFCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNFCY 402
           + +F  F   L  +++F P  + QLTP+E RIL +VQQLLEYP A QGWNNWT+FCY
Sbjct: 1   MESFWVFFCFLFSVIIF-PVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFCY 56


>ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g14390-like [Cucumis sativus]
           gi|449478441|ref|XP_004155319.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g14390-like [Cucumis sativus]
          Length = 728

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = +1

Query: 250 FLLQLLIIVLFCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNFCY 402
           F     I  +  P    QL PSE+RILF++Q+LLEYP AFQGW+NWTNFCY
Sbjct: 10  FWFPAFIFAVIFPVSTGQLPPSETRILFEIQKLLEYPVAFQGWSNWTNFCY 60


>ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +1

Query: 250 FLLQLLIIVLFCPKILSQLTPSESRILFKVQQLLEYPPAFQGWNNWTNFCY 402
           F     +IV+       QL PSE+RILF+VQQLLEYP   QGWNNWTNFCY
Sbjct: 10  FAALFTLIVMQVSISRGQLAPSETRILFQVQQLLEYPQVLQGWNNWTNFCY 60


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