BLASTX nr result

ID: Coptis24_contig00036907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036907
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]        101   7e-20
sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03...   101   7e-20
ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicu...   100   2e-19
gb|ACD99685.1| histone H1-like protein [Camellia sinensis]             98   8e-19
ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycin...    97   1e-18

>gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
          Length = 202

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/76 (61%), Positives = 64/76 (84%)
 Frame = -3

Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236
           IKEALLA++EKGGSS +A+ KY+E+++K +LP  FRKIL +QLKNS  KG L+K+KASYK
Sbjct: 56  IKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYK 115

Query: 235 LSDASKKESSTKIAAE 188
           LS+A KKE++TK + +
Sbjct: 116 LSEAGKKETTTKTSTK 131


>sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03076.1| histone H1
           [Solanum pennellii]
          Length = 202

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/76 (61%), Positives = 64/76 (84%)
 Frame = -3

Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236
           IKEALLA++EKGGSS +A+ KY+E+++K +LP  FRKIL +QLKNS  KG L+K+KASYK
Sbjct: 56  IKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYK 115

Query: 235 LSDASKKESSTKIAAE 188
           LS+A KKE++TK + +
Sbjct: 116 LSEAGKKETTTKTSTK 131


>ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicum]
           gi|825521|emb|CAA77867.1| H1 histone-like protein
           [Solanum lycopersicum]
          Length = 207

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/76 (60%), Positives = 64/76 (84%)
 Frame = -3

Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236
           IKEALL+++EKGGSS +A+ KY+E+++K +LP  FRKIL +QLKNS  KG L+K+KASYK
Sbjct: 61  IKEALLSLNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYK 120

Query: 235 LSDASKKESSTKIAAE 188
           LS+A KKE++TK + +
Sbjct: 121 LSEAGKKETTTKTSTK 136


>gb|ACD99685.1| histone H1-like protein [Camellia sinensis]
          Length = 207

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/71 (66%), Positives = 59/71 (83%)
 Frame = -3

Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236
           IKEALLA++EK GSS +AI KY+EE++K  LPE FRKIL +QLKNS  KG L+K+KASYK
Sbjct: 60  IKEALLALNEKSGSSPYAIAKYMEEEHKPVLPENFRKILGLQLKNSAAKGKLIKIKASYK 119

Query: 235 LSDASKKESST 203
           LS+A KK++ T
Sbjct: 120 LSEAGKKDNGT 130


>ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycine max]
           gi|255629522|gb|ACU15107.1| unknown [Glycine max]
          Length = 202

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/73 (61%), Positives = 62/73 (84%)
 Frame = -3

Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236
           IKEAL+A++EKGGSS +AI KY+EE++KA LP  F+KIL +QLKN   +G LVK+KASYK
Sbjct: 54  IKEALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYK 113

Query: 235 LSDASKKESSTKI 197
           L++A+KKE++ K+
Sbjct: 114 LTEAAKKENTAKV 126


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