BLASTX nr result
ID: Coptis24_contig00036907
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00036907 (417 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense] 101 7e-20 sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03... 101 7e-20 ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicu... 100 2e-19 gb|ACD99685.1| histone H1-like protein [Camellia sinensis] 98 8e-19 ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycin... 97 1e-18 >gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense] Length = 202 Score = 101 bits (251), Expect = 7e-20 Identities = 47/76 (61%), Positives = 64/76 (84%) Frame = -3 Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236 IKEALLA++EKGGSS +A+ KY+E+++K +LP FRKIL +QLKNS KG L+K+KASYK Sbjct: 56 IKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYK 115 Query: 235 LSDASKKESSTKIAAE 188 LS+A KKE++TK + + Sbjct: 116 LSEAGKKETTTKTSTK 131 >sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03076.1| histone H1 [Solanum pennellii] Length = 202 Score = 101 bits (251), Expect = 7e-20 Identities = 47/76 (61%), Positives = 64/76 (84%) Frame = -3 Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236 IKEALLA++EKGGSS +A+ KY+E+++K +LP FRKIL +QLKNS KG L+K+KASYK Sbjct: 56 IKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYK 115 Query: 235 LSDASKKESSTKIAAE 188 LS+A KKE++TK + + Sbjct: 116 LSEAGKKETTTKTSTK 131 >ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicum] gi|825521|emb|CAA77867.1| H1 histone-like protein [Solanum lycopersicum] Length = 207 Score = 100 bits (248), Expect = 2e-19 Identities = 46/76 (60%), Positives = 64/76 (84%) Frame = -3 Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236 IKEALL+++EKGGSS +A+ KY+E+++K +LP FRKIL +QLKNS KG L+K+KASYK Sbjct: 61 IKEALLSLNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYK 120 Query: 235 LSDASKKESSTKIAAE 188 LS+A KKE++TK + + Sbjct: 121 LSEAGKKETTTKTSTK 136 >gb|ACD99685.1| histone H1-like protein [Camellia sinensis] Length = 207 Score = 97.8 bits (242), Expect = 8e-19 Identities = 47/71 (66%), Positives = 59/71 (83%) Frame = -3 Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236 IKEALLA++EK GSS +AI KY+EE++K LPE FRKIL +QLKNS KG L+K+KASYK Sbjct: 60 IKEALLALNEKSGSSPYAIAKYMEEEHKPVLPENFRKILGLQLKNSAAKGKLIKIKASYK 119 Query: 235 LSDASKKESST 203 LS+A KK++ T Sbjct: 120 LSEAGKKDNGT 130 >ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycine max] gi|255629522|gb|ACU15107.1| unknown [Glycine max] Length = 202 Score = 97.1 bits (240), Expect = 1e-18 Identities = 45/73 (61%), Positives = 62/73 (84%) Frame = -3 Query: 415 IKEALLAIHEKGGSSTHAITKYIEEQYKADLPETFRKILSVQLKNSVVKGNLVKVKASYK 236 IKEAL+A++EKGGSS +AI KY+EE++KA LP F+KIL +QLKN +G LVK+KASYK Sbjct: 54 IKEALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYK 113 Query: 235 LSDASKKESSTKI 197 L++A+KKE++ K+ Sbjct: 114 LTEAAKKENTAKV 126