BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036873
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22850.3| unnamed protein product [Vitis vinifera]              232   3e-59
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi...   232   3e-59
ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
ref|XP_002519267.1| pentatricopeptide repeat-containing protein,...   226   1e-57

>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  232 bits (591), Expect = 3e-59
 Identities = 110/157 (70%), Positives = 130/157 (82%)
 Frame = +1

Query: 1   AEQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNI 180
           +EQALK FYR+ DF  KPTVKIYN +LD LL+E++F MINP+Y NMKK+G+ PN+FTYNI
Sbjct: 127 SEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNI 186

Query: 181 LLKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFDPIV 360
           LLKALCKNNRVDGA +LLVEMS  GC PD+VSYTT+++S+CK GKVKEARELA  F P V
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSV 246

Query: 361 PVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           PVYNALING CKE+  EE F LL EM  +GI PNV++
Sbjct: 247 PVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
 Frame = +1

Query: 10  ALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLK 189
           A+K+F ++ + GC P    YN LLD+LL + +F     +  +M+  G+  NL TYN ++ 
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIY 534

Query: 190 ALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEAREL-----ASRFDP 354
             C    +  A  LL +M   G  PD ++   ++ + CK GKV  A +L     A ++ P
Sbjct: 535 GYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594

Query: 355 IVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            +  Y +LI+G C    +EE    L  M   GISPNV T
Sbjct: 595 DIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
 Frame = +1

Query: 43  GCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGA 222
           GC P V  Y C++D L   S F+    +  NM+ E   PN  T+N  +K LC + RVD A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 223 RRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEA----RELASR-FDPIVPVYNALING 387
            ++  +M  +GC P+  +Y  ++ S+ KD +  EA    +++  R  +  +  YN +I G
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 388 FCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           +C    + E   LLG+M  RG  P+ +T
Sbjct: 536 YCCAGMLGEALELLGKMVVRGTKPDAIT 563



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
 Frame = +1

Query: 16  KMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKAL 195
           KMF R    GC P +  +  L+     +   H     +  M +EG+VPN+  YN L+  L
Sbjct: 306 KMFAR----GCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361

Query: 196 CKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARE-----LASRFDPIV 360
           C    +  A  +  +M  NGCCP+  +Y+ ++    K G +  A E     +     P V
Sbjct: 362 CSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNV 421

Query: 361 PVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
             Y  +++  C+     + + L+  M+     PN VT
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
 Frame = +1

Query: 52  PTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGARRL 231
           P+V +YN L++ +  E  F     +   M  +G+ PN+ +Y  ++ AL     V+ +  +
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 232 LVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRF-----DPIVPVYNALINGFCK 396
           L +M   GC P+  ++T+++      G   EA +   R       P V  YNAL++G C 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 397 EFDIEEGFFLLGEMRGRGISPNVVT 471
           +  + +   +  +M   G  PNV T
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRT 388



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
 Frame = +1

Query: 1   AEQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNI 180
           + +AL  + R+   G  P V  YN L+  L ++        V+  M+  G  PN+ TY+ 
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 181 LLKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD--- 351
           L+    K   +DGA  +   M  +GC P+ V+YT +V  +C++    +A  L        
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 352 --PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
             P    +N  I G C    ++    +  +M   G  PN  T
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493


>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  232 bits (591), Expect = 3e-59
 Identities = 110/157 (70%), Positives = 130/157 (82%)
 Frame = +1

Query: 1   AEQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNI 180
           +EQALK FYR+ DF  KPTVKIYN +LD LL+E++F MINP+Y NMKK+G+ PN+FTYNI
Sbjct: 127 SEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNI 186

Query: 181 LLKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFDPIV 360
           LLKALCKNNRVDGA +LLVEMS  GC PD+VSYTT+++S+CK GKVKEARELA  F P V
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSV 246

Query: 361 PVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           PVYNALING CKE+  EE F LL EM  +GI PNV++
Sbjct: 247 PVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
 Frame = +1

Query: 10  ALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLK 189
           A+K+F ++ + GC P    YN LLD+LL + +F     +  +M+  G+  NL TYN ++ 
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIY 534

Query: 190 ALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEAREL-----ASRFDP 354
             C    +  A  LL +M   G  PD ++   ++ + CK GKV  A +L     A ++ P
Sbjct: 535 GYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594

Query: 355 IVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            +  Y +LI+G C    +EE    L  M   GISPNV T
Sbjct: 595 DIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
 Frame = +1

Query: 43  GCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGA 222
           GC P V  Y C++D L   S F+    +  NM+ E   PN  T+N  +K LC + RVD A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 223 RRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEA----RELASR-FDPIVPVYNALING 387
            ++  +M  +GC P+  +Y  ++ S+ KD +  EA    +++  R  +  +  YN +I G
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 388 FCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           +C    + E   LLG+M  RG  P+ +T
Sbjct: 536 YCCAGMLGEALELLGKMVVRGTKPDAIT 563



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
 Frame = +1

Query: 16  KMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKAL 195
           KMF R    GC P +  +  L+     +   H     +  M +EG+VPN+  YN L+  L
Sbjct: 306 KMFAR----GCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361

Query: 196 CKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARE-----LASRFDPIV 360
           C    +  A  +  +M  NGCCP+  +Y+ ++    K G +  A E     +     P V
Sbjct: 362 CSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNV 421

Query: 361 PVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
             Y  +++  C+     + + L+  M+     PN VT
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
 Frame = +1

Query: 52  PTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGARRL 231
           P+V +YN L++ +  E  F     +   M  +G+ PN+ +Y  ++ AL     V+ +  +
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 232 LVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRF-----DPIVPVYNALINGFCK 396
           L +M   GC P+  ++T+++      G   EA +   R       P V  YNAL++G C 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 397 EFDIEEGFFLLGEMRGRGISPNVVT 471
           +  + +   +  +M   G  PNV T
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRT 388



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
 Frame = +1

Query: 1   AEQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNI 180
           + +AL  + R+   G  P V  YN L+  L ++        V+  M+  G  PN+ TY+ 
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 181 LLKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD--- 351
           L+    K   +DGA  +   M  +GC P+ V+YT +V  +C++    +A  L        
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 352 --PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
             P    +N  I G C    ++    +  +M   G  PN  T
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493


>ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/157 (69%), Positives = 129/157 (82%)
 Frame = +1

Query: 1   AEQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNI 180
           AEQALKMFYR+ +FGCKPTV+IYN LLD LL+E+KF MINP+Y NMKK+GL+PN+FTYNI
Sbjct: 125 AEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNI 184

Query: 181 LLKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFDPIV 360
           LLKALCKN+RVD A +L VEMS  GC PD V+YTT+V+S+CK GK+ +ARELA RF P V
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSV 244

Query: 361 PVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           PVYNALI+G CKE  IE    LLGEM   G+ PNVV+
Sbjct: 245 PVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVS 281



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
 Frame = +1

Query: 10  ALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLK 189
           A + + R+   GC+P V  Y C++D L   S F   N +   M  EG  PN  T+N  +K
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIK 462

Query: 190 ALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEAREL-----ASRFDP 354
            LC N RV+ A +LL  M  +GC P+  +Y  ++ ++ +  K +EA  L     A    P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522

Query: 355 IVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            +  YN ++ GF +   + E   L G+   RG +P+ +T
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
 Frame = +1

Query: 4   EQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNIL 183
           E A+K+  R+   GC P +  YN LLD L   +K+     ++  ++   L PNL TYN +
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTV 530

Query: 184 LKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASR------ 345
           L    +   +  A +L  +    G  PD ++Y T++ + CK GKVK A +L  R      
Sbjct: 531 LYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590

Query: 346 FDPIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           + P +  Y +LI G C   +IEE    L +   +GI PN  T
Sbjct: 591 WHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
 Frame = +1

Query: 4   EQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNIL 183
           E+AL++  ++   GC P V  Y+ L+D           +  +  M   G  PN+ TY  +
Sbjct: 366 EEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCM 425

Query: 184 LKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD---- 351
           +  LCKN+  D A  L+ +M+  GC P+ +++ T +  +C +G+V+ A +L  R      
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485

Query: 352 -PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            P +  YN L++   +    EE F L  E+  R + PN+VT
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
 Frame = +1

Query: 7   QALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILL 186
           +AL ++  +   GC+P V  YN L+  L +         V   M++ G +PN+ TY+IL+
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391

Query: 187 KALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRF-----D 351
               K+  + GA      M  +GC P+ V+YT +V  +CK+    +A  L  +       
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451

Query: 352 PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           P    +N  I G C    +E    LL  M+G G  PN+ T
Sbjct: 452 PNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
 Frame = +1

Query: 49  KPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGARR 228
           KP+V +YN L+D +  E +  +   +   M   G+ PN+ +Y+ ++ +LC +  V+ A  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 229 LLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEAREL-----ASRFDPIVPVYNALINGFC 393
           L  +M   GC  +  ++T ++      GK+ EA +L         +P V  YN LI+G C
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 394 KEFDIEEGFFLLGEMRGRGISPNVVT 471
               +EE   +  +M+  G  PNV T
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTT 386



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
 Frame = +1

Query: 4   EQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNIL 183
           E A+K+   + D G  P V  Y+C++++L       +   ++  M   G   N+ T+  L
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL 320

Query: 184 LKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD---- 351
           +K      ++  A  L   M ++GC P+ V+Y T++  +C +G ++EA ++  +      
Sbjct: 321 IKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGC 380

Query: 352 -PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            P V  Y+ LI+GF K  D+         M   G  PNVVT
Sbjct: 381 LPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421


>ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/157 (69%), Positives = 129/157 (82%)
 Frame = +1

Query: 1   AEQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNI 180
           AEQALKMFYR+ +FGCKPTV+IYN LLD LL+E+KF MINP+Y NMKK+GL+PN+FTYNI
Sbjct: 125 AEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNI 184

Query: 181 LLKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFDPIV 360
           LLKALCKN+RVD A +L VEMS  GC PD V+YTT+V+S+CK GK+ +ARELA RF P V
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSV 244

Query: 361 PVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           PVYNALI+G CKE  IE    LLGEM   G+ PNVV+
Sbjct: 245 PVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVS 281



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
 Frame = +1

Query: 10  ALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLK 189
           A + + R+   GC+P V  Y C++D L   S F   N +   M  EG  PN  T+N  +K
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIK 462

Query: 190 ALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEAREL-----ASRFDP 354
            LC N RV+ A +LL  M  +GC P+  +Y  ++ ++ +  K +EA  L     A    P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522

Query: 355 IVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            +  YN ++ GF +   + E   L G+   RG +P+ +T
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
 Frame = +1

Query: 4   EQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNIL 183
           E A+K+  R+   GC P +  YN LLD L   +K+     ++  ++   L PNL TYN +
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTV 530

Query: 184 LKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASR------ 345
           L    +   +  A +L  +    G  PD ++Y T++ + CK GKVK A +L  R      
Sbjct: 531 LYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590

Query: 346 FDPIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           + P +  Y +LI G C   +IEE    L +   +GI PN  T
Sbjct: 591 WHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
 Frame = +1

Query: 4   EQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNIL 183
           E+AL++  ++   GC P V  Y+ L+D           +  +  M   G  PN+ TY  +
Sbjct: 366 EEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCM 425

Query: 184 LKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD---- 351
           +  LCKN+  D A  L+ +M+  GC P+ +++ T +  +C +G+V+ A +L  R      
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485

Query: 352 -PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            P +  YN L++   +    EE F L  E+  R + PN+VT
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
 Frame = +1

Query: 7   QALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILL 186
           +AL ++  +   GC+P V  YN L+  L +         V   M++ G +PN+ TY+IL+
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391

Query: 187 KALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRF-----D 351
               K+  + GA      M  +GC P+ V+YT +V  +CK+    +A  L  +       
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451

Query: 352 PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           P    +N  I G C    +E    LL  M+G G  PN+ T
Sbjct: 452 PNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
 Frame = +1

Query: 49  KPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGARR 228
           KP+V +YN L+D +  E +  +   +   M   G+ PN+ +Y+ ++ +LC +  V+ A  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 229 LLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEAREL-----ASRFDPIVPVYNALINGFC 393
           L  +M   GC  +  ++T ++      GK+ EA +L         +P V  YN LI+G C
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 394 KEFDIEEGFFLLGEMRGRGISPNVVT 471
               +EE   +  +M+  G  PNV T
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTT 386



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
 Frame = +1

Query: 4   EQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNIL 183
           E A+K+   + D G  P V  Y+C++++L       +   ++  M   G   N+ T+  L
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL 320

Query: 184 LKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD---- 351
           +K      ++  A  L   M ++GC P+ V+Y T++  +C +G ++EA ++  +      
Sbjct: 321 IKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGC 380

Query: 352 -PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            P V  Y+ LI+GF K  D+         M   G  PNVVT
Sbjct: 381 LPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421


>ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541582|gb|EEF43131.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 665

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/157 (68%), Positives = 132/157 (84%)
 Frame = +1

Query: 1   AEQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNI 180
           AEQALKMFYR+ +FGC+PTVKIYN LLD +L+E++F MI P+Y NMK++G  PN++TYNI
Sbjct: 130 AEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNI 189

Query: 181 LLKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFDPIV 360
           LLKALCKNNRVDGA +LLVEMS  GC PD VSYTT+++SM K GKV+EAREL+ RF P V
Sbjct: 190 LLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNV 249

Query: 361 PVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            VYNALINGFC+E+ ++E F LLG+M  +GI PNV+T
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVIT 286



 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
 Frame = +1

Query: 4   EQALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNIL 183
           E A+ +F ++  +GC P +K YN +LD LL E++      +   M+++G+  NL TYN +
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTI 535

Query: 184 LKALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD---- 351
               C   + + A +LL +M   G  PD ++Y T+  + C  GKVK A +L  +      
Sbjct: 536 FGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK 595

Query: 352 --PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
             P V  Y +L+ G C +  +EE    L +M   GI  N  T
Sbjct: 596 WVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAAT 637



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
 Frame = +1

Query: 10  ALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLK 189
           A +++ ++   GC P V +Y  +++ L   S F     +   M  +   PN  T+N  +K
Sbjct: 408 ASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIK 467

Query: 190 ALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFDP----- 354
            LC + RV+ A  L  +M + GC P+  +Y  ++  + K+ ++KEA EL +  +      
Sbjct: 468 GLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMEL 527

Query: 355 IVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
            +  YN +  GFC     EE   LLG+M   G+ P+ +T
Sbjct: 528 NLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAIT 566



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
 Frame = +1

Query: 7   QALKMFYRLNDFGCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILL 186
           +AL ++ R+ + G +P V  YN L+  L +  K      V   M++ G  PN+ TY  L+
Sbjct: 337 EALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALI 396

Query: 187 KALCKNNRVDGARRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD----- 351
               K   + GA  +  +M  NGC P+ V YT++V  +C+     +A  L  +       
Sbjct: 397 DGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCP 456

Query: 352 PIVPVYNALINGFCKEFDIEEGFFLLGEMRGRGISPNVVT 471
           P    +N  I G C    +E    L  +M   G SPN+ T
Sbjct: 457 PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKT 496



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
 Frame = +1

Query: 49  KPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGARR 228
           +P V +YN L++    E K   +  +   M ++G+ PN+ TY+ ++ +L     V+ A  
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALA 305

Query: 229 LLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASR-----FDPIVPVYNALINGFC 393
           +  +M   GC P+  ++T+++      G+V EA  + +R     F+P V  YN LI+G C
Sbjct: 306 VWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLC 365

Query: 394 KEFDIEEGFFLLGEMRGRGISPNVVT 471
               + E   +  +M   G SPNV T
Sbjct: 366 SHGKMGEAVSVSSKMERNGCSPNVST 391



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
 Frame = +1

Query: 43  GCKPTVKIYNCLLDTLLNESKFHMINPVYVNMKKEGLVPNLFTYNILLKALCKNNRVDGA 222
           G  P V  Y+ ++ +L       +   V+  M   G  PN++T+  L+K      RV  A
Sbjct: 279 GIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA 338

Query: 223 RRLLVEMSKNGCCPDDVSYTTIVASMCKDGKVKEARELASRFD-----PIVPVYNALING 387
             +   M++ G  P+ V+Y T++  +C  GK+ EA  ++S+ +     P V  Y ALI+G
Sbjct: 339 LNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDG 398

Query: 388 FCKEFDIEEGFFLLGEMRGRGISPNVV 468
           F K  D+     +  +M   G  PNVV
Sbjct: 399 FAKAGDLVGASEIWNKMMTNGCIPNVV 425