BLASTX nr result

ID: Coptis24_contig00036807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036807
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27477.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat rece...    81   8e-14
emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]    81   8e-14
dbj|BAD94850.1| receptor-kinase isolog [Arabidopsis thaliana]          72   4e-11
gb|AAD31328.1|AC007354_1 T16B5.1, partial [Arabidopsis thaliana]       70   2e-10

>emb|CBI27477.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = -2

Query: 158 GDRDALLSLKSTIDPLNTLQWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNL 3
           GD + LL+LKS IDP N+LQW G  SDFCKW GV+EC RGRVTKLVLEHLNL
Sbjct: 23  GDGETLLALKSWIDPSNSLQWRG--SDFCKWQGVKECMRGRVTKLVLEHLNL 72


>ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g60630-like [Vitis
           vinifera]
          Length = 662

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = -2

Query: 158 GDRDALLSLKSTIDPLNTLQWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNL 3
           GD + LL+LKS IDP N+LQW G  SDFCKW GV+EC RGRVTKLVLEHLNL
Sbjct: 32  GDGETLLALKSWIDPSNSLQWRG--SDFCKWQGVKECMRGRVTKLVLEHLNL 81


>emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]
          Length = 695

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = -2

Query: 158 GDRDALLSLKSTIDPLNTLQWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNL 3
           GD + LL+LKS IDP N+LQW G  SDFCKW GV+EC RGRVTKLVLEHLNL
Sbjct: 23  GDGETLLALKSWIDPSNSLQWRG--SDFCKWQGVKECMRGRVTKLVLEHLNL 72


>dbj|BAD94850.1| receptor-kinase isolog [Arabidopsis thaliana]
          Length = 663

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/56 (66%), Positives = 44/56 (78%)
 Frame = -2

Query: 170 ARSRGDRDALLSLKSTIDPLNTLQWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNL 3
           ARS GD +ALLSLKS+IDP N++ W G  +D C W GVREC  GRV+KLVLE+LNL
Sbjct: 30  ARS-GDVEALLSLKSSIDPSNSISWRG--TDLCNWQGVRECMNGRVSKLVLEYLNL 82


>gb|AAD31328.1|AC007354_1 T16B5.1, partial [Arabidopsis thaliana]
          Length = 105

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = -2

Query: 170 ARSRGDRDALLSLKSTIDPLNTLQWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNL 3
           ARS  D +ALLSLKS+IDP N++ W G  +D C W GVREC  GRV+KLVLE+LNL
Sbjct: 30  ARS-SDVEALLSLKSSIDPSNSISWRG--TDLCNWQGVRECMNGRVSKLVLEYLNL 82


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