BLASTX nr result

ID: Coptis24_contig00036727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036727
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315774.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_003633685.1| PREDICTED: uncharacterized protein LOC100854...    85   5e-15
ref|XP_003631990.1| PREDICTED: uncharacterized protein LOC100852...    84   9e-15
ref|XP_003536535.1| PREDICTED: uncharacterized protein LOC100780...    83   2e-14
ref|XP_003556046.1| PREDICTED: uncharacterized protein LOC100527...    83   2e-14

>ref|XP_002315774.1| predicted protein [Populus trichocarpa] gi|222864814|gb|EEF01945.1|
           predicted protein [Populus trichocarpa]
          Length = 62

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/49 (83%), Positives = 41/49 (83%)
 Frame = +1

Query: 1   LWVRLHSTQKQSRGIYILYEDVKSCPYEDVHVLWSILVESNTHPLTSKQ 147
           LW RLHST K  RGIYILYEDVKSC YEDVHVLWSILVESNT  L SKQ
Sbjct: 14  LWFRLHSTPKNRRGIYILYEDVKSCQYEDVHVLWSILVESNTPSLPSKQ 62


>ref|XP_003633685.1| PREDICTED: uncharacterized protein LOC100854663 [Vitis vinifera]
           gi|298204895|emb|CBI34202.3| unnamed protein product
           [Vitis vinifera]
          Length = 62

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/49 (81%), Positives = 42/49 (85%)
 Frame = +1

Query: 1   LWVRLHSTQKQSRGIYILYEDVKSCPYEDVHVLWSILVESNTHPLTSKQ 147
           LW RLHSTQK+SRGIYILYEDVKSC YEDV +LWSILVESN   L SKQ
Sbjct: 14  LWFRLHSTQKKSRGIYILYEDVKSCQYEDVQILWSILVESNAPTLPSKQ 62


>ref|XP_003631990.1| PREDICTED: uncharacterized protein LOC100852693 [Vitis vinifera]
           gi|297737042|emb|CBI26243.3| unnamed protein product
           [Vitis vinifera]
          Length = 62

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = +1

Query: 1   LWVRLHSTQKQSRGIYILYEDVKSCPYEDVHVLWSILVESNTHPLTSKQ 147
           LW RLHS Q++SRGIYILYEDVKSCPYEDVHVLWSILVES++    SKQ
Sbjct: 14  LWFRLHSAQRKSRGIYILYEDVKSCPYEDVHVLWSILVESHSPSPPSKQ 62


>ref|XP_003536535.1| PREDICTED: uncharacterized protein LOC100780769 [Glycine max]
          Length = 62

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 4   WVRLHSTQKQSRGIYILYEDVKSCPYEDVHVLWSILVESNTHPLTSKQ 147
           W+RL+STQK+ RGIYILYEDVKSCPYEDVHVLWSILVES++  L SK+
Sbjct: 15  WLRLNSTQKKRRGIYILYEDVKSCPYEDVHVLWSILVESHSPSLPSKK 62


>ref|XP_003556046.1| PREDICTED: uncharacterized protein LOC100527065 [Glycine max]
          Length = 62

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 4   WVRLHSTQKQSRGIYILYEDVKSCPYEDVHVLWSILVESNTHPLTSKQ 147
           W+RL+STQK+ RGIYILYEDVKSCPYEDVHVLWSILVES++  L SK+
Sbjct: 15  WLRLNSTQKKRRGIYILYEDVKSCPYEDVHVLWSILVESHSPSLPSKK 62


Top