BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036721
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277627.2| PREDICTED: uncharacterized protein LOC100266...    79   5e-13
gb|ACN36523.1| unknown [Zea mays]                                      78   8e-13
ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus ...    73   3e-11
ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|1...    70   2e-10
ref|NP_566045.1| RING/U-box domain-containing protein [Arabidops...    64   2e-08

>ref|XP_002277627.2| PREDICTED: uncharacterized protein LOC100266798 [Vitis vinifera]
           gi|297742479|emb|CBI34628.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/101 (44%), Positives = 52/101 (51%)
 Frame = +2

Query: 2   RVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXX 181
           RVDP FRG +   E+ RGC+ PLWVA                     ALPVN        
Sbjct: 135 RVDPNFRGSNIAQEQARGCFKPLWVALSILIGGLLLDVLISIVLGVSALPVNIIIGVIVV 194

Query: 182 XXXXTALRLALECCHELSLRRAVQIPNTNVTLGPLGYHPTV 304
               TA+RLALE CHE SLRR  Q  +TNVT   LGY+PT+
Sbjct: 195 LGLGTAIRLALEFCHEWSLRRVSQRVDTNVT---LGYYPTL 232


>gb|ACN36523.1| unknown [Zea mays]
          Length = 85

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/69 (59%), Positives = 47/69 (68%)
 Frame = -1

Query: 249 TALLKLNSWQHXXXXXXXXXXXRTTRTPIIMLTGNAETPREIDISTSNNSPPIRIENATQ 70
           T LL+ +SWQH           RT RTPII+LTG+AETPRE DISTSN  PPIRI NATQ
Sbjct: 10  TFLLEPHSWQHSRARRRAMPNPRTIRTPIIILTGSAETPRETDISTSNKRPPIRIANATQ 69

Query: 69  RGL*QPLSR 43
            GL  P ++
Sbjct: 70  SGLNHPYTK 78


>ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223541940|gb|EEF43486.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 247

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/98 (45%), Positives = 49/98 (50%)
 Frame = +2

Query: 2   RVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXX 181
           RVDP FR      + ERGC+SPLWVAF                    ALPVN        
Sbjct: 154 RVDPTFR----PRDPERGCFSPLWVAFSILIGGLLLDVLISITLGVSALPVNIIIGVIVV 209

Query: 182 XXXXTALRLALECCHELSLRRAVQIPNTNVTLGPLGYH 295
               TALRLALE CHE S RR VQ  ++NV   PLGYH
Sbjct: 210 LGLGTALRLALEFCHEWSFRRVVQRVDSNV---PLGYH 244


>ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|118484049|gb|ABK93910.1|
           unknown [Populus trichocarpa]
           gi|222860104|gb|EEE97651.1| predicted protein [Populus
           trichocarpa]
          Length = 253

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/99 (43%), Positives = 48/99 (48%)
 Frame = +2

Query: 2   RVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXX 181
           R+DP FR      +R+RGC+SPLWVAF                    ALPVN        
Sbjct: 160 RIDPNFR----PRDRDRGCFSPLWVAFSILIGGLLLDVLISITLGVSALPVNIIIGVIVV 215

Query: 182 XXXXTALRLALECCHELSLRRAVQIPNTNVTLGPLGYHP 298
               TALRLALE CHE S RRAVQ  + N      GYHP
Sbjct: 216 LGLGTALRLALEFCHEWSFRRAVQRADANEN---HGYHP 251


>ref|NP_566045.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|2979545|gb|AAC06154.1| expressed protein [Arabidopsis
           thaliana] gi|27311551|gb|AAO00741.1| Unknown protein
           [Arabidopsis thaliana] gi|30023706|gb|AAP13386.1|
           At2g45530 [Arabidopsis thaliana]
           gi|330255472|gb|AEC10566.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 240

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/83 (44%), Positives = 42/83 (50%)
 Frame = +2

Query: 2   RVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXXALPVNXXXXXXXX 181
           R+DP++R      ERERGC+SPLWVAF                    ALPVN        
Sbjct: 141 RIDPSYR----QEERERGCFSPLWVAFSILIGGLMLDVLISITLGVSALPVNIIIGVIVV 196

Query: 182 XXXXTALRLALECCHELSLRRAV 250
               TALRL LE C+E SLRRAV
Sbjct: 197 LGLGTALRLTLEFCYEWSLRRAV 219