BLASTX nr result

ID: Coptis24_contig00036663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036663
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281805.1| PREDICTED: uncharacterized protein LOC100262...    94   1e-17
emb|CAN61497.1| hypothetical protein VITISV_032988 [Vitis vinifera]    94   1e-17
ref|XP_002510342.1| conserved hypothetical protein [Ricinus comm...    93   3e-17
ref|XP_003611914.1| Coiled-coil domain-containing protein 109A [...    86   4e-15
gb|ACJ85190.1| unknown [Medicago truncatula] gi|388507180|gb|AFK...    86   4e-15

>ref|XP_002281805.1| PREDICTED: uncharacterized protein LOC100262482 [Vitis vinifera]
           gi|302142441|emb|CBI19644.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 64/168 (38%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
 Frame = -1

Query: 452 MACRKTLAHRLYNVTKISS-----------------MVPNPAI-TTFRRHFLNPSEPNEK 327
           MA R+TLA RL N+T+  S                 +VP+ A+ T F   FL+ S+    
Sbjct: 1   MALRRTLAKRLLNITRTPSPAGTLEHSPISSPSFQNLVPSNAVKTNFHDDFLDSSD---S 57

Query: 326 GFFKRFLQKRDIVQSATSTDYSPTTSMSLIGNKLMKKLKEINTDKDRIRLDGLSXXXXXX 147
           GFF+RFLQ+R + Q A      P      +G+KL +KL+ +N   +R+RLDGLS      
Sbjct: 58  GFFRRFLQRRALNQLARF----PELLSVPVGDKLREKLRGLNGTGERLRLDGLSPPAPAM 113

Query: 146 XXXXXEVQISVEDAKKILRITQLEILKSKLRMVPRNCISYSEFLESAI 3
                   ISVEDA+K+L+++Q+E LK  LR +P+N I YSEF++  +
Sbjct: 114 RDSLDG--ISVEDARKLLKVSQVEKLKWTLRQIPKNSIPYSEFIQICV 159


>emb|CAN61497.1| hypothetical protein VITISV_032988 [Vitis vinifera]
          Length = 356

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 64/168 (38%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
 Frame = -1

Query: 452 MACRKTLAHRLYNVTKISS-----------------MVPNPAI-TTFRRHFLNPSEPNEK 327
           MA R+TLA RL N+T+  S                 +VP+ A+ T F   FL+ S+    
Sbjct: 1   MALRRTLAKRLLNITRTPSPAGTLEHSPISSPSFQNLVPSNAVKTNFHDDFLDSSD---S 57

Query: 326 GFFKRFLQKRDIVQSATSTDYSPTTSMSLIGNKLMKKLKEINTDKDRIRLDGLSXXXXXX 147
           GFF+RFLQ+R + Q A      P      +G+KL +KL+ +N   +R+RLDGLS      
Sbjct: 58  GFFRRFLQRRALNQLARF----PELLSVPVGDKLREKLRGLNGTGERLRLDGLSPPAPAM 113

Query: 146 XXXXXEVQISVEDAKKILRITQLEILKSKLRMVPRNCISYSEFLESAI 3
                   ISVEDA+K+L+++Q+E LK  LR +P+N I YSEF++  +
Sbjct: 114 RDSLDG--ISVEDARKLLKVSQVEKLKWTLRQIPKNSIPYSEFIQICV 159


>ref|XP_002510342.1| conserved hypothetical protein [Ricinus communis]
           gi|223551043|gb|EEF52529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 354

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
 Frame = -1

Query: 452 MACRKTLAHRLYNVTKISSMV----------------PNPAITTFRRHFLNPSEPNEKGF 321
           MA RK+L+ RL++  + +S                  PNPA T F R +L     + KGF
Sbjct: 1   MALRKSLSERLFDGYRTTSHAVSLEYPLIYLKSTIPPPNPAKTNFHREYLTSPGASGKGF 60

Query: 320 FKRFLQKRDIVQSATSTDYSPTTSMSLIGNKLMKKLKEINTDKDRIRLDGLSXXXXXXXX 141
           F+RFL +R I Q        P    + +G KL + LK IN  KDR+RLD ++        
Sbjct: 61  FQRFLHRRAINQL-------PEFLSAPVGEKLREGLKGINITKDRLRLDEVAPPTFTGDV 113

Query: 140 XXXEVQISVEDAKKILRITQLEILKSKLRMVPRNCISYSEFLESAI 3
                 ISV+DA+K+LRI+Q+E LK++LR +P++ + YSEF++  +
Sbjct: 114 NLFG--ISVQDARKVLRISQVEKLKARLREIPKSSVLYSEFVQICV 157


>ref|XP_003611914.1| Coiled-coil domain-containing protein 109A [Medicago truncatula]
           gi|355513249|gb|AES94872.1| Coiled-coil
           domain-containing protein 109A [Medicago truncatula]
          Length = 343

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
 Frame = -1

Query: 452 MACRKTLAHRLYNVTKISSM------VPNPAITTFRRHFLNPSEPNEKGFFKRFLQKRDI 291
           MA +KTLA RL+N+TKISS       + + +++  +      SEP E G FKRF+ KR  
Sbjct: 1   MAFKKTLAQRLFNITKISSQNLTNCRISSSSVSVSKSESDISSEPGENGAFKRFIHKRTG 60

Query: 290 VQSATSTDYSPTTSMSLIGNKLMKKLKEINTDKDRIRLDGLSXXXXXXXXXXXEVQ-ISV 114
           ++   +   S      L    LM+KLK ++  ++RIRLDGL            +   +SV
Sbjct: 61  LEPKQTGFKS-----ELHQPNLMEKLKTMDNGRNRIRLDGLIIKTPAEKPAMPKEDGVSV 115

Query: 113 EDAKKILRITQLEILKSKLRMVPRNCISYSEFL 15
            D KK+L++ QLE++KS+LR   ++C++ SE +
Sbjct: 116 SDVKKLLKVAQLEMVKSRLRESSKSCVTVSELI 148


>gb|ACJ85190.1| unknown [Medicago truncatula] gi|388507180|gb|AFK41656.1| unknown
           [Medicago truncatula]
          Length = 203

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 13/160 (8%)
 Frame = -1

Query: 452 MACRKTLAHRLYNVTKISSMV-------------PNPAITTFRRHFLNPSEPNEKGFFKR 312
           MA +KTL  RL ++TKISS                +P+    R     P + +  G  +R
Sbjct: 1   MAFKKTLTQRLLSLTKISSQSLSNCRISSSPLQSRHPSFVANRDIAPEPGDSSNDGVLRR 60

Query: 311 FLQKRDIVQSATSTDYSPTTSMSLIGNKLMKKLKEINTDKDRIRLDGLSXXXXXXXXXXX 132
           FL K+ +  S     +   +      + L++KL+E++  ++RIRLDGL+           
Sbjct: 61  FLHKQAVFNSELRPPHPGGS------DGLLQKLREMDIARNRIRLDGLTPPEAEMEVATE 114

Query: 131 EVQISVEDAKKILRITQLEILKSKLRMVPRNCISYSEFLE 12
           E++ + ED +K+LR TQLE +KSK+RM+ ++C++YSEF+E
Sbjct: 115 ELKSTAEDVRKLLRATQLEAVKSKIRMIQQSCVTYSEFVE 154


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